[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************************************************
ID : mmu-mir-466d
DESCRIPTION : mmu-mir-466d MI0005546 Mus musculus miR-466d stem-loop
CHROMOSOME : 2
SPAN : 10433594 - 10433689
LENGTH : 96
SEQUENCE : CATGTGTGTTTGTGTGTGCGTACATGTACATGTGTGTATATGAATATACATATACATACACGCACACATAGATACGCACGCACACACACACACAGG
OVERHANG THRESHOLD : 75%
*********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466d-3p
ACCID : MI0005546
PARENT : mmu-mir-466d
CHROMOSOME : 2
START : 10433594
STOP : 10433689
OFFSET : 51..71
SEQUENCE : TATACATACACGCACACATAG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466d-5p
ACCID : MI0005546
PARENT : mmu-mir-466d
CHROMOSOME : 2
START : 10433594
STOP : 10433689
OFFSET : 11..32
SEQUENCE : TGTGTGTGCGTACATGTACATG
STRAND : +
******************************
*** MATURE-3P ***
________________________________________________________________________________________________
CATGTGTGTTTGTGTGTGCGTACATGTACATGTGTGTATATGAATATACATATACATACACGCACACATAGATACGCACGCACACACACACACAGG REF 2 10433594 - 10433689
TATACATACACGCACACATAG MATURE-3P 2 10433645 - 10433760 mmu-miR-466d-3p +
TGTGTGTGCGTACATGTACATG MATURE-5P 2 10433605 - 10433721 mmu-miR-466d-5p +
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................ATACATACACGCACACATAGt......................... read_8474_0_3_0_2_0_0 MATURE-3P 5 50.00 3 37.50 2 100.00 t 20
...................................................ATACATACACGCACACAT............................ read_126234_1_0_1_0_0_0 MATURE-3P 2 20.00 2 25.00 0 0.00 18
...................................................ATACATACACGCACACATAG.......................... read_82465_0_1_1_0_0_0 MATURE-3P 2 20.00 2 25.00 0 0.00 20
...................................................ATACATACACGCACACATAGA......................... read_332814_0_1_0_0_0_0 MATURE-3P 1 10.00 1 12.50 0 0.00 21
---------- ---------- ----------
10 8 2
(80.00) (20.00)
*** MATURE-5P ***
________________________________________________________________________________________________
CATGTGTGTTTGTGTGTGCGTACATGTACATGTGTGTATATGAATATACATATACATACACGCACACATAGATACGCACGCACACACACACACAGG REF 2 10433594 - 10433689
TATACATACACGCACACATAG MATURE-3P 2 10433645 - 10433760 mmu-miR-466d-3p +
TGTGTGTGCGTACATGTACATG MATURE-5P 2 10433605 - 10433721 mmu-miR-466d-5p +
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............GTGTGCGTACATGTACATGTGT.............................................................. read_269895_0_1_0_0_0_0 MATURE-5P 1 100.00 1 100.00 0 0 22
---------- ---------- ----------
1 1 0
(100.00) (0.00)
*** OTHER ***
________________________________________________________________________________________________
CATGTGTGTTTGTGTGTGCGTACATGTACATGTGTGTATATGAATATACATATACATACACGCACACATAGATACGCACGCACACACACACACAGG REF 2 10433594 - 10433689
TATACATACACGCACACATAG MATURE-3P 2 10433645 - 10433760 mmu-miR-466d-3p +
TGTGTGTGCGTACATGTACATG MATURE-5P 2 10433605 - 10433721 mmu-miR-466d-5p +
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........................................................................ACGCACGCACACACACACA..... read_114986_1_1_0_0_0_0 OTHER 2 66.67 2 66.67 0 0 19
.........................................................................ACGCACGCACACACACACACA... read_168380_0_0_1_0_0_0 OTHER 1 33.33 1 33.33 0 0 21
---------- ---------- ----------
3 3 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 8 2 10 71.43%
MATURE-5P 1 0 1 7.14%
OTHER 3 0 3 21.43%
---------- ---------- ----------
12 2 14
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