[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************************************
ID : mmu-mir-466c
DESCRIPTION : mmu-mir-466c MI0005505 Mus musculus miR-466c stem-loop
CHROMOSOME : 2
SPAN : 10412966 - 10413049
LENGTH : 84
SEQUENCE : GTATATGTGTTGATGTGTGTGTGCATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC
OVERHANG THRESHOLD : 75%
*********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466c-3p
ACCID : MI0005505
PARENT : mmu-mir-466c
CHROMOSOME : 2
START : 10412966
STOP : 10413049
OFFSET : 51..73
SEQUENCE : TATACATACACGCACACATAAGA
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466c-5p
ACCID : MI0005505
PARENT : mmu-mir-466c
CHROMOSOME : 2
START : 10412966
STOP : 10413049
OFFSET : 12..33
SEQUENCE : GATGTGTGTGTGCATGTACATA
STRAND : +
******************************
*** MATURE-3P ***
____________________________________________________________________________________
GTATATGTGTTGATGTGTGTGTGCATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC REF 2 10412966 - 10413049
TATACATACACGCACACATAAGA MATURE-3P 2 10413017 - 10413122 mmu-miR-466c-3p +
GATGTGTGTGTGCATGTACATA MATURE-5P 2 10412978 - 10413082 mmu-miR-466c-5p +
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................ATACATACACGCACACATAAGA............ read_275954_2_1_0_0_0_0 MATURE-3P 3 30.00 3 37.50 0 0.00 22
...................................................ATACATACACGCACACAT................ read_126234_1_0_1_0_0_0 MATURE-3P 2 20.00 2 25.00 0 0.00 18
...................................................ATACATACACGCACACATAAG............. read_35929_0_0_1_0_0_1 MATURE-3P 2 20.00 1 12.50 1 50.00 21
...................................................ATACATACACGCACACATAA.............. read_309563_0_0_1_0_1_0 MATURE-3P 2 20.00 1 12.50 1 50.00 20
.....................................................ACATACACGCACACATAA.............. read_351745_0_0_1_0_0_0 MATURE-3P 1 10.00 1 12.50 0 0.00 18
---------- ---------- ----------
10 8 2
(80.00) (20.00)
*** MATURE-5P ***
____________________________________________________________________________________
GTATATGTGTTGATGTGTGTGTGCATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC REF 2 10412966 - 10413049
TATACATACACGCACACATAAGA MATURE-3P 2 10413017 - 10413122 mmu-miR-466c-3p +
GATGTGTGTGTGCATGTACATA MATURE-5P 2 10412978 - 10413082 mmu-miR-466c-5p +
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........GATGTGTGTGTGCATGTACAT..................................................... read_305018_0_3_0_0_0_1 MATURE-5P 4 80.00 3 75.00 1 100.00 21
...........GATGTGTGTGTGCATGTAC....................................................... read_411256_0_0_1_0_0_0 MATURE-5P 1 20.00 1 25.00 0 0.00 19
---------- ---------- ----------
5 4 1
(80.00) (20.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 8 2 10 66.67%
MATURE-5P 4 1 5 33.33%
---------- ---------- ----------
12 3 15
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