[BEGIN]

REFERENCE HAIRPIN
******************************************************************************************************
ID                 : mmu-mir-466b-3
DESCRIPTION        : mmu-mir-466b-3 MI0005504 Mus musculus miR-466b-3 stem-loop
CHROMOSOME         : 2
SPAN               : 10425192 - 10425272
LENGTH             : 81
SEQUENCE           : TATATGTGTTGATGTGTGTGTACATGTACATGTGTGAATATGATATACAAATACATACACGCACACATAAGACACATATGA
OVERHANG THRESHOLD : 75%
******************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE-3P
ID         : mmu-miR-466b-3-3p
ACCID      : MI0005504
PARENT     : mmu-mir-466b-3
CHROMOSOME : 2
START      : 10425192
STOP       : 10425272
OFFSET     : 50..72
SEQUENCE   : AATACATACACGCACACATAAGA
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURE-5P
ID         : mmu-miR-466b-5p
ACCID      : MI0005504
PARENT     : mmu-mir-466b-3
CHROMOSOME : 2
START      : 10425192
STOP       : 10425272
OFFSET     : 11..32
SEQUENCE   : GATGTGTGTGTACATGTACATG
STRAND     : +
******************************



*** MATURE-3P ***
_________________________________________________________________________________
TATATGTGTTGATGTGTGTGTACATGTACATGTGTGAATATGATATACAAATACATACACGCACACATAAGACACATATGA REF                  2                    10425192 - 10425272  
                                                 AATACATACACGCACACATAAGA          MATURE-3P            2                    10425242 - 10425344  mmu-miR-466b-3-3p    +                    
          GATGTGTGTGTACATGTACATG                                                  MATURE-5P            2                    10425203 - 10425304  mmu-miR-466b-5p      +                    
_________________________________________________________________________________

                                                                             -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..................................................ATACATACACGCACACATAAGA..........   read_275954_2_1_0_0_0_0    MATURE-3P            3        30.00            3        37.50            0         0.00                        22   
..................................................ATACATACACGCACACAT..............   read_126234_1_0_1_0_0_0    MATURE-3P            2        20.00            2        25.00            0         0.00                        18   
..................................................ATACATACACGCACACATAAG...........    read_35929_0_0_1_0_0_1    MATURE-3P            2        20.00            1        12.50            1        50.00                        21   
..................................................ATACATACACGCACACATAA............   read_309563_0_0_1_0_1_0    MATURE-3P            2        20.00            1        12.50            1        50.00                        20   
....................................................ACATACACGCACACATAA............   read_351745_0_0_1_0_0_0    MATURE-3P            1        10.00            1        12.50            0         0.00                        18   
                                                                                                                            ----------                ----------                ----------   
                                                                                                                                    10                         8                         2                                          
                                                                                                                                                         (80.00)                   (20.00)                                       




*** MATURE-5P ***
_________________________________________________________________________________
TATATGTGTTGATGTGTGTGTACATGTACATGTGTGAATATGATATACAAATACATACACGCACACATAAGACACATATGA REF                  2                    10425192 - 10425272  
                                                 AATACATACACGCACACATAAGA          MATURE-3P            2                    10425242 - 10425344  mmu-miR-466b-3-3p    +                    
          GATGTGTGTGTACATGTACATG                                                  MATURE-5P            2                    10425203 - 10425304  mmu-miR-466b-5p      +                    
_________________________________________________________________________________

                                                                             -SEQ-                       -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.............GTGTGTGTACATGTACATGTGT...............................................       read_39708_0_0_0_1_1_0    MATURE-5P            2        66.67            0         0.00            2       100.00                        22   
...........ATGTGTGTGTACATGTACA....................................................      read_378182_0_0_1_0_0_0    MATURE-5P            1        33.33            1       100.00            0         0.00                        19   
                                                                                                                               ----------                ----------                ----------   
                                                                                                                                        3                         1                         2                                          
                                                                                                                                                            (33.33)                   (66.67)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
      MATURE-3P               8               2              10          76.92%
      MATURE-5P               1               2               3          23.08%
                     ----------      ----------      ----------                
                              9               4              13                



[END]
