[BEGIN]

REFERENCE HAIRPIN
*******************************************************************************************************
ID                 : mmu-mir-466b-2
DESCRIPTION        : mmu-mir-466b-2 MI0005503 Mus musculus miR-466b-2 stem-loop
CHROMOSOME         : 2
SPAN               : 10420312 - 10420393
LENGTH             : 82
SEQUENCE           : TGTATGTGTTGATGTGTGTGTACATGTACATGTCTGAATATGATATACATATACATACACGCACACATAAGACACATATGAG
OVERHANG THRESHOLD : 75%
*******************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE-3P
ID         : mmu-miR-466b-3p
ACCID      : MI0005503
PARENT     : mmu-mir-466b-2
CHROMOSOME : 2
START      : 10420312
STOP       : 10420393
OFFSET     : 50..72
SEQUENCE   : TATACATACACGCACACATAAGA
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURE-5P
ID         : mmu-miR-466b-5p
ACCID      : MI0005503
PARENT     : mmu-mir-466b-2
CHROMOSOME : 2
START      : 10420312
STOP       : 10420393
OFFSET     : 11..32
SEQUENCE   : GATGTGTGTGTACATGTACATG
STRAND     : +
******************************



*** MATURE-3P ***
__________________________________________________________________________________
TGTATGTGTTGATGTGTGTGTACATGTACATGTCTGAATATGATATACATATACATACACGCACACATAAGACACATATGAG REF                  2                    10420312 - 10420393  
                                                 TATACATACACGCACACATAAGA           MATURE-3P            2                    10420362 - 10420465  mmu-miR-466b-3p      +                    
          GATGTGTGTGTACATGTACATG                                                   MATURE-5P            2                    10420323 - 10420425  mmu-miR-466b-5p      +                    
__________________________________________________________________________________

                                                                              -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..................................................ATACATACACGCACACATAAGA...........   read_275954_2_1_0_0_0_0    MATURE-3P            3        30.00            3        37.50            0         0.00                        22   
..................................................ATACATACACGCACACAT...............   read_126234_1_0_1_0_0_0    MATURE-3P            2        20.00            2        25.00            0         0.00                        18   
..................................................ATACATACACGCACACATAAG............    read_35929_0_0_1_0_0_1    MATURE-3P            2        20.00            1        12.50            1        50.00                        21   
..................................................ATACATACACGCACACATAA.............   read_309563_0_0_1_0_1_0    MATURE-3P            2        20.00            1        12.50            1        50.00                        20   
....................................................ACATACACGCACACATAA.............   read_351745_0_0_1_0_0_0    MATURE-3P            1        10.00            1        12.50            0         0.00                        18   
                                                                                                                             ----------                ----------                ----------   
                                                                                                                                     10                         8                         2                                          
                                                                                                                                                          (80.00)                   (20.00)                                       




*** MATURE-5P ***
__________________________________________________________________________________
TGTATGTGTTGATGTGTGTGTACATGTACATGTCTGAATATGATATACATATACATACACGCACACATAAGACACATATGAG REF                  2                    10420312 - 10420393  
                                                 TATACATACACGCACACATAAGA           MATURE-3P            2                    10420362 - 10420465  mmu-miR-466b-3p      +                    
          GATGTGTGTGTACATGTACATG                                                   MATURE-5P            2                    10420323 - 10420425  mmu-miR-466b-5p      +                    
__________________________________________________________________________________

                                                                              -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...........ATGTGTGTGTACATGTACA.....................................................   read_378182_0_0_1_0_0_0    MATURE-5P            1       100.00            1       100.00            0            0                        19   
                                                                                                                             ----------                ----------                ----------   
                                                                                                                                      1                         1                         0                                          
                                                                                                                                                         (100.00)                    (0.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
      MATURE-3P               8               2              10          90.91%
      MATURE-5P               1               0               1           9.09%
                     ----------      ----------      ----------                
                              9               2              11                



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