[BEGIN]

REFERENCE HAIRPIN
*******************************************************************************************************
ID                 : mmu-mir-466b-1
DESCRIPTION        : mmu-mir-466b-1 MI0005502 Mus musculus miR-466b-1 stem-loop
CHROMOSOME         : 2
SPAN               : 10422740 - 10422821
LENGTH             : 82
SEQUENCE           : TGTATGTGTTGATGTGTGTGTACATGTACATGTGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAG
OVERHANG THRESHOLD : 75%
*******************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE-3P
ID         : mmu-miR-466b-3p
ACCID      : MI0005502
PARENT     : mmu-mir-466b-1
CHROMOSOME : 2
START      : 10422740
STOP       : 10422821
OFFSET     : 50..72
SEQUENCE   : TATACATACACGCACACATAAGA
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURE-5P
ID         : mmu-miR-466b-5p
ACCID      : MI0005502
PARENT     : mmu-mir-466b-1
CHROMOSOME : 2
START      : 10422740
STOP       : 10422821
OFFSET     : 11..32
SEQUENCE   : GATGTGTGTGTACATGTACATG
STRAND     : +
******************************



*** MATURE-3P ***
__________________________________________________________________________________
TGTATGTGTTGATGTGTGTGTACATGTACATGTGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAG REF                  2                    10422740 - 10422821  
                                                 TATACATACACGCACACATAAGA           MATURE-3P            2                    10422790 - 10422893  mmu-miR-466b-3p      +                    
          GATGTGTGTGTACATGTACATG                                                   MATURE-5P            2                    10422751 - 10422853  mmu-miR-466b-5p      +                    
__________________________________________________________________________________

                                                                              -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..................................................ATACATACACGCACACATAAGA...........   read_275954_2_1_0_0_0_0    MATURE-3P            3        30.00            3        37.50            0         0.00                        22   
..................................................ATACATACACGCACACAT...............   read_126234_1_0_1_0_0_0    MATURE-3P            2        20.00            2        25.00            0         0.00                        18   
..................................................ATACATACACGCACACATAAG............    read_35929_0_0_1_0_0_1    MATURE-3P            2        20.00            1        12.50            1        50.00                        21   
..................................................ATACATACACGCACACATAA.............   read_309563_0_0_1_0_1_0    MATURE-3P            2        20.00            1        12.50            1        50.00                        20   
....................................................ACATACACGCACACATAA.............   read_351745_0_0_1_0_0_0    MATURE-3P            1        10.00            1        12.50            0         0.00                        18   
                                                                                                                             ----------                ----------                ----------   
                                                                                                                                     10                         8                         2                                          
                                                                                                                                                          (80.00)                   (20.00)                                       




*** MATURE-5P ***
__________________________________________________________________________________
TGTATGTGTTGATGTGTGTGTACATGTACATGTGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAG REF                  2                    10422740 - 10422821  
                                                 TATACATACACGCACACATAAGA           MATURE-3P            2                    10422790 - 10422893  mmu-miR-466b-3p      +                    
          GATGTGTGTGTACATGTACATG                                                   MATURE-5P            2                    10422751 - 10422853  mmu-miR-466b-5p      +                    
__________________________________________________________________________________

                                                                              -SEQ-                       -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.............GTGTGTGTACATGTACATGTGT................................................       read_39708_0_0_0_1_1_0    MATURE-5P            2        66.67            0         0.00            2       100.00                        22   
...........ATGTGTGTGTACATGTACA.....................................................      read_378182_0_0_1_0_0_0    MATURE-5P            1        33.33            1       100.00            0         0.00                        19   
                                                                                                                                ----------                ----------                ----------   
                                                                                                                                         3                         1                         2                                          
                                                                                                                                                             (33.33)                   (66.67)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
      MATURE-3P               8               2              10          76.92%
      MATURE-5P               1               2               3          23.08%
                     ----------      ----------      ----------                
                              9               4              13                



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