[BEGIN]

REFERENCE HAIRPIN
**********************************************************************************************
ID                 : mmu-mir-466a
DESCRIPTION        : mmu-mir-466a MI0002401 Mus musculus miR-466a stem-loop
CHROMOSOME         : 2
SPAN               : 10429545 - 10429617
LENGTH             : 73
SEQUENCE           : TATATGTGTTTATGTGTGTGTACATGTACATATGTGAATATGATATCCATATACATACACGCACACATAAGAC
OVERHANG THRESHOLD : 75%
**********************************************************************************************


TARGET
******************************
CATEGORY   : MATURE-3P
ID         : mmu-miR-466a-3p
ACCID      : MI0002401
PARENT     : mmu-mir-466a
CHROMOSOME : 2
START      : 10429545
STOP       : 10429617
OFFSET     : 50..72
SEQUENCE   : TATACATACACGCACACATAAGA
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURE-5P
ID         : mmu-miR-466a-5p
ACCID      : MI0002401
PARENT     : mmu-mir-466a
CHROMOSOME : 2
START      : 10429545
STOP       : 10429617
OFFSET     : 11..32
SEQUENCE   : TATGTGTGTGTACATGTACATA
STRAND     : +
******************************



*** MATURE-3P ***
_________________________________________________________________________
TATATGTGTTTATGTGTGTGTACATGTACATATGTGAATATGATATCCATATACATACACGCACACATAAGAC REF                  2                    10429545 - 10429617  
                                                 TATACATACACGCACACATAAGA  MATURE-3P            2                    10429595 - 10429689  mmu-miR-466a-3p      +                    
          TATGTGTGTGTACATGTACATA                                          MATURE-5P            2                    10429556 - 10429649  mmu-miR-466a-5p      +                    
_________________________________________________________________________

                                                                     -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..................................................ATACATACACGCACACATAAGA..   read_275954_2_1_0_0_0_0    MATURE-3P            3        30.00            3        37.50            0         0.00                        22   
..................................................ATACATACACGCACACAT......   read_126234_1_0_1_0_0_0    MATURE-3P            2        20.00            2        25.00            0         0.00                        18   
..................................................ATACATACACGCACACATAAG...    read_35929_0_0_1_0_0_1    MATURE-3P            2        20.00            1        12.50            1        50.00                        21   
..................................................ATACATACACGCACACATAA....   read_309563_0_0_1_0_1_0    MATURE-3P            2        20.00            1        12.50            1        50.00                        20   
....................................................ACATACACGCACACATAA....   read_351745_0_0_1_0_0_0    MATURE-3P            1        10.00            1        12.50            0         0.00                        18   
                                                                                                                    ----------                ----------                ----------   
                                                                                                                            10                         8                         2                                          
                                                                                                                                                 (80.00)                   (20.00)                                       




*** MATURE-5P ***
_________________________________________________________________________
TATATGTGTTTATGTGTGTGTACATGTACATATGTGAATATGATATCCATATACATACACGCACACATAAGAC REF                  2                    10429545 - 10429617  
                                                 TATACATACACGCACACATAAGA  MATURE-3P            2                    10429595 - 10429689  mmu-miR-466a-3p      +                    
          TATGTGTGTGTACATGTACATA                                          MATURE-5P            2                    10429556 - 10429649  mmu-miR-466a-5p      +                    
_________________________________________________________________________

                                                                     -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...........ATGTGTGTGTACATGTACATAT.........................................   read_240317_1_0_0_0_0_0    MATURE-5P            1        50.00            1        50.00            0            0                        22   
...........ATGTGTGTGTACATGTACA............................................   read_378182_0_0_1_0_0_0    MATURE-5P            1        50.00            1        50.00            0            0                        19   
                                                                                                                    ----------                ----------                ----------   
                                                                                                                             2                         2                         0                                          
                                                                                                                                                (100.00)                    (0.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
      MATURE-3P               8               2              10          83.33%
      MATURE-5P               2               0               2          16.67%
                     ----------      ----------      ----------                
                             10               2              12                



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