[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************
ID : mmu-mir-466a
DESCRIPTION : mmu-mir-466a MI0002401 Mus musculus miR-466a stem-loop
CHROMOSOME : 2
SPAN : 10429545 - 10429617
LENGTH : 73
SEQUENCE : TATATGTGTTTATGTGTGTGTACATGTACATATGTGAATATGATATCCATATACATACACGCACACATAAGAC
OVERHANG THRESHOLD : 75%
**********************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466a-3p
ACCID : MI0002401
PARENT : mmu-mir-466a
CHROMOSOME : 2
START : 10429545
STOP : 10429617
OFFSET : 50..72
SEQUENCE : TATACATACACGCACACATAAGA
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466a-5p
ACCID : MI0002401
PARENT : mmu-mir-466a
CHROMOSOME : 2
START : 10429545
STOP : 10429617
OFFSET : 11..32
SEQUENCE : TATGTGTGTGTACATGTACATA
STRAND : +
******************************
*** MATURE-3P ***
_________________________________________________________________________
TATATGTGTTTATGTGTGTGTACATGTACATATGTGAATATGATATCCATATACATACACGCACACATAAGAC REF 2 10429545 - 10429617
TATACATACACGCACACATAAGA MATURE-3P 2 10429595 - 10429689 mmu-miR-466a-3p +
TATGTGTGTGTACATGTACATA MATURE-5P 2 10429556 - 10429649 mmu-miR-466a-5p +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..................................................ATACATACACGCACACATAAGA.. read_275954_2_1_0_0_0_0 MATURE-3P 3 30.00 3 37.50 0 0.00 22
..................................................ATACATACACGCACACAT...... read_126234_1_0_1_0_0_0 MATURE-3P 2 20.00 2 25.00 0 0.00 18
..................................................ATACATACACGCACACATAAG... read_35929_0_0_1_0_0_1 MATURE-3P 2 20.00 1 12.50 1 50.00 21
..................................................ATACATACACGCACACATAA.... read_309563_0_0_1_0_1_0 MATURE-3P 2 20.00 1 12.50 1 50.00 20
....................................................ACATACACGCACACATAA.... read_351745_0_0_1_0_0_0 MATURE-3P 1 10.00 1 12.50 0 0.00 18
---------- ---------- ----------
10 8 2
(80.00) (20.00)
*** MATURE-5P ***
_________________________________________________________________________
TATATGTGTTTATGTGTGTGTACATGTACATATGTGAATATGATATCCATATACATACACGCACACATAAGAC REF 2 10429545 - 10429617
TATACATACACGCACACATAAGA MATURE-3P 2 10429595 - 10429689 mmu-miR-466a-3p +
TATGTGTGTGTACATGTACATA MATURE-5P 2 10429556 - 10429649 mmu-miR-466a-5p +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........ATGTGTGTGTACATGTACATAT......................................... read_240317_1_0_0_0_0_0 MATURE-5P 1 50.00 1 50.00 0 0 22
...........ATGTGTGTGTACATGTACA............................................ read_378182_0_0_1_0_0_0 MATURE-5P 1 50.00 1 50.00 0 0 19
---------- ---------- ----------
2 2 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 8 2 10 83.33%
MATURE-5P 2 0 2 16.67%
---------- ---------- ----------
10 2 12
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