[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-450b
DESCRIPTION : mmu-mir-450b MI0004705 Mus musculus miR-450b stem-loop
CHROMOSOME : X
SPAN : 50401174 - 50401255
LENGTH : 82
SEQUENCE : GATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATC
OVERHANG THRESHOLD : 75%
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TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-450b-3p
ACCID : MI0004705
PARENT : mmu-mir-450b
CHROMOSOME : X
START : 50401174
STOP : 50401255
OFFSET : 50..71
SEQUENCE : ATTGGGAACATTTTGCATGCAT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-450b-5p
ACCID : MI0004705
PARENT : mmu-mir-450b
CHROMOSOME : X
START : 50401174
STOP : 50401255
OFFSET : 14..35
SEQUENCE : TTTTGCAGTATGTTCCTGAATA
STRAND : -
******************************
*** MATURE-3P ***
__________________________________________________________________________________
GATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATC REF X 50401174 - 50401255
ATTGGGAACATTTTGCATGCAT MATURE-3P X 50401224 - 50401326 mmu-miR-450b-3p -
TTTTGCAGTATGTTCCTGAATA MATURE-5P X 50401188 - 50401290 mmu-miR-450b-5p -
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................ATTGGGAACATTTTGCATGC.............. read_356143_3_1_2_0_0_0 MATURE-3P 6 46.15 6 75.00 0 0.00 20
.................................................ATTGGGAACATTTTGCATGCt............. read_11225_0_0_0_0_2_0 MATURE-3P 2 15.38 0 0.00 2 40.00 t 20
...................................................TGGGAACATTTTGCATGCAT............ read_92006_0_0_0_1_0_0 MATURE-3P 1 7.69 0 0.00 1 20.00 20
.................................................ATTGGGAACATTTTGCATGCA............. read_298620_0_0_1_0_0_0 MATURE-3P 1 7.69 1 12.50 0 0.00 21
...................................................TGGGAACATTTTGCATGCATta.......... read_123070_0_0_0_0_1_0 MATURE-3P 1 7.69 0 0.00 1 20.00 ta 20
.................................................ATTGGGAACATTTTGCATGt.............. read_147503_0_0_0_0_1_0 MATURE-3P 1 7.69 0 0.00 1 20.00 t 19
.................................................ATTGGGAACATTTTGCAT................ read_247860_0_0_1_0_0_0 MATURE-3P 1 7.69 1 12.50 0 0.00 18
---------- ---------- ----------
13 8 5
(61.54) (38.46)
*** MATURE-5P ***
__________________________________________________________________________________
GATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATC REF X 50401174 - 50401255
ATTGGGAACATTTTGCATGCAT MATURE-3P X 50401224 - 50401326 mmu-miR-450b-3p -
TTTTGCAGTATGTTCCTGAATA MATURE-5P X 50401188 - 50401290 mmu-miR-450b-5p -
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............TTTGCAGTATGTTCCTGAAT................................................. read_305289_2_1_0_3_1_2 MATURE-5P 9 75.00 3 50.00 6 100.00 20
..............TTTGCAGTATGTTCCTGAATAC............................................... read_242577_0_0_1_0_0_0 MATURE-5P 1 8.33 1 16.67 0 0.00 22
..............TTTGCAGTATGTTCCTGAATACA.............................................. read_368122_0_0_1_0_0_0 MATURE-5P 1 8.33 1 16.67 0 0.00 23
..............TTTGCAGTATGTTCCTGAA.................................................. read_54711_0_0_1_0_0_0 MATURE-5P 1 8.33 1 16.67 0 0.00 19
---------- ---------- ----------
12 6 6
(50.00) (50.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 8 5 13 52.00%
MATURE-5P 6 6 12 48.00%
---------- ---------- ----------
14 11 25
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