[BEGIN]
REFERENCE HAIRPIN
******************************************************************************************
ID : mmu-mir-450a-2
DESCRIPTION : mmu-mir-450a-2 MI0003537 Mus musculus miR-450a-2 stem-loop
CHROMOSOME : X
SPAN : 50401476 - 50401544
LENGTH : 69
SEQUENCE : GAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTC
OVERHANG THRESHOLD : 75%
******************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-450a-3p
ACCID : MI0003537
PARENT : mmu-mir-450a-2
CHROMOSOME : X
START : 50401476
STOP : 50401544
OFFSET : 43..64
SEQUENCE : ATTGGGGATGCTTTGCATTCAT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-450a-5p
ACCID : MI0003537
PARENT : mmu-mir-450a-2
CHROMOSOME : X
START : 50401476
STOP : 50401544
OFFSET : 8..29
SEQUENCE : TTTTGCGATGTGTTCCTAATAT
STRAND : -
******************************
*** MATURE-5P ***
_____________________________________________________________________
GAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTC REF X 50401476 - 50401544
ATTGGGGATGCTTTGCATTCAT MATURE-3P X 50401519 - 50401608 mmu-miR-450a-3p -
TTTTGCGATGTGTTCCTAATAT MATURE-5P X 50401484 - 50401573 mmu-miR-450a-5p -
_____________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........TTTGCGATGTGTTCCTAATAT......................................... read_386981_73_72_63_24_18_41 MATURE-5P 291 67.36 208 68.42 83 64.84 21
........TTTGCGATGTGTTCCTAAT........................................... read_311400_15_13_11_5_8_6 MATURE-5P 58 13.43 39 12.83 19 14.84 19
........TTTGCGATGTGTTCCTAATA.......................................... read_259951_6_10_5_2_3_2 MATURE-5P 28 6.48 21 6.91 7 5.47 20
........TTTGCGATGTGTTCCTAATAa......................................... read_192924_5_3_2_0_2_1 MATURE-5P 13 3.01 10 3.29 3 2.34 a 20
........TTTGCGATGTGTTaCTAATAT......................................... read_218622_3_3_1_0_1_1 MATURE-5P 9 2.08 7 2.30 2 1.56 13A7
........TTTGCGATGTGTTCCTAATATa........................................ read_185185_1_1_1_3_0_0 MATURE-5P 6 1.39 3 0.99 3 2.34 a 21
........TTTGCGATGTGTTCCTAA............................................ read_147323_1_1_1_0_1_1 MATURE-5P 5 1.16 3 0.99 2 1.56 18
........TTTGCGATGTGTTtCTAATAT......................................... read_80768_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 13T7
........TTTGCGATGTGTTCCTAATATt........................................ read_193695_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 t 21
........TTTGtGATGTGTTCCTAATAT......................................... read_346144_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 4T16
........TTTGCGcTGTGTTCCTAATAT......................................... read_149649_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 6C14
........TTTGCGATGTGTTaCTAATA.......................................... read_191968_0_0_1_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 13A6
........TTTGCGATGTGTTCCTAATAg......................................... read_101096_0_0_0_1_0_0 MATURE-5P 1 0.23 0 0.00 1 0.78 g 20
........TTTGCGATGTGTTCCTA............................................. read_319307_0_0_0_1_0_0 MATURE-5P 1 0.23 0 0.00 1 0.78 17
........TTTGCGATGaGTTCCTAATAT......................................... read_395436_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 9A11
........TTTGCGATGTGTTCCTAAa........................................... read_285787_0_0_0_1_0_0 MATURE-5P 1 0.23 0 0.00 1 0.78 a 18
.........TTGCGATGTGTTCCTAAT........................................... read_392559_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 18
........TTTGCGATGTGTTCCTAATgt......................................... read_67676_0_0_0_0_1_0 MATURE-5P 1 0.23 0 0.00 1 0.78 gt 19
........TTTGCGATGTGTTCCTAATt.......................................... read_165513_0_0_0_0_1_0 MATURE-5P 1 0.23 0 0.00 1 0.78 t 19
........TTTGCGATGTGTTCCTAATATG........................................ read_245635_0_0_1_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 22
........TTTGCGATGTGTTCtTAATAT......................................... read_353730_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 14T6
........TTTGCGATGTGTTCaTAATA.......................................... read_131930_0_0_0_0_0_1 MATURE-5P 1 0.23 0 0.00 1 0.78 14A5
........TTTGCGATGTGTTCCTtATAT......................................... read_147282_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 16T4
..........TGCGATGTGTTCCTAATAT......................................... read_273347_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 19
........TTTGCGATGTGTTCCTAAaaaaa....................................... read_105322_0_0_0_0_0_1 MATURE-5P 1 0.23 0 0.00 1 0.78 aaaaa 18
........TTTGCGATGTGTTCCcAATAT......................................... read_177795_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 15C5
.........TTGCGATGTGTTCCTAATga......................................... read_282573_0_0_0_1_0_0 MATURE-5P 1 0.23 0 0.00 1 0.78 ga 18
........TTTGCGATGTGTTCCTAATtg......................................... read_111883_0_0_0_0_0_1 MATURE-5P 1 0.23 0 0.00 1 0.78 tg 19
........cTTGCGATGTGTTCCTAATAT......................................... read_112920_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 20
---------- ---------- ----------
432 304 128
(70.37) (29.63)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-5P 304 128 432 100.00%
---------- ---------- ----------
304 128 432
[END]