[BEGIN]
REFERENCE HAIRPIN
****************************************************************************************************************
ID : mmu-mir-450a-1
DESCRIPTION : mmu-mir-450a-1 MI0001653 Mus musculus miR-450a-1 stem-loop
CHROMOSOME : X
SPAN : 50401331 - 50401421
LENGTH : 91
SEQUENCE : GAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACA
OVERHANG THRESHOLD : 75%
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TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-450a-5p
ACCID : MI0001653
PARENT : mmu-mir-450a-1
CHROMOSOME : X
START : 50401331
STOP : 50401421
OFFSET : 18..39
SEQUENCE : TTTTGCGATGTGTTCCTAATAT
STRAND : -
******************************
*** MATURE-5P ***
___________________________________________________________________________________________
GAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACA REF X 50401331 - 50401421
TTTTGCGATGTGTTCCTAATAT MATURE-5P X 50401349 - 50401460 mmu-miR-450a-5p -
___________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..................TTTGCGATGTGTTCCTAATAT..................................................... read_386981_73_72_63_24_18_41 MATURE-5P 291 67.36 208 68.42 83 64.84 21
..................TTTGCGATGTGTTCCTAAT....................................................... read_311400_15_13_11_5_8_6 MATURE-5P 58 13.43 39 12.83 19 14.84 19
..................TTTGCGATGTGTTCCTAATA...................................................... read_259951_6_10_5_2_3_2 MATURE-5P 28 6.48 21 6.91 7 5.47 20
..................TTTGCGATGTGTTCCTAATAa..................................................... read_192924_5_3_2_0_2_1 MATURE-5P 13 3.01 10 3.29 3 2.34 a 20
..................TTTGCGATGTGTTaCTAATAT..................................................... read_218622_3_3_1_0_1_1 MATURE-5P 9 2.08 7 2.30 2 1.56 13A7
..................TTTGCGATGTGTTCCTAATATa.................................................... read_185185_1_1_1_3_0_0 MATURE-5P 6 1.39 3 0.99 3 2.34 a 21
..................TTTGCGATGTGTTCCTAA........................................................ read_147323_1_1_1_0_1_1 MATURE-5P 5 1.16 3 0.99 2 1.56 18
..................TTTGCGATGTGTTtCTAATAT..................................................... read_80768_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 13T7
..................TTTGCGATGTGTTCCTAATATt.................................................... read_193695_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 t 21
..................TTTGtGATGTGTTCCTAATAT..................................................... read_346144_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 4T16
..................TTTGCGcTGTGTTCCTAATAT..................................................... read_149649_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 6C14
..................TTTGCGATGTGTTaCTAATA...................................................... read_191968_0_0_1_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 13A6
..................TTTGCGATGTGTTCCTAATAg..................................................... read_101096_0_0_0_1_0_0 MATURE-5P 1 0.23 0 0.00 1 0.78 g 20
..................TTTGCGATGTGTTCCTA......................................................... read_319307_0_0_0_1_0_0 MATURE-5P 1 0.23 0 0.00 1 0.78 17
..................TTTGCGATGaGTTCCTAATAT..................................................... read_395436_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 9A11
..................TTTGCGATGTGTTCCTAAa....................................................... read_285787_0_0_0_1_0_0 MATURE-5P 1 0.23 0 0.00 1 0.78 a 18
...................TTGCGATGTGTTCCTAAT....................................................... read_392559_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 18
..................TTTGCGATGTGTTCCTAATgt..................................................... read_67676_0_0_0_0_1_0 MATURE-5P 1 0.23 0 0.00 1 0.78 gt 19
..................TTTGCGATGTGTTCCTAATt...................................................... read_165513_0_0_0_0_1_0 MATURE-5P 1 0.23 0 0.00 1 0.78 t 19
..................TTTGCGATGTGTTCCTAATATG.................................................... read_245635_0_0_1_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 22
..................TTTGCGATGTGTTCtTAATAT..................................................... read_353730_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 14T6
..................TTTGCGATGTGTTCaTAATA...................................................... read_131930_0_0_0_0_0_1 MATURE-5P 1 0.23 0 0.00 1 0.78 14A5
..................TTTGCGATGTGTTCCTtATAT..................................................... read_147282_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 16T4
....................TGCGATGTGTTCCTAATAT..................................................... read_273347_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 19
..................TTTGCGATGTGTTCCTAAaaaaa................................................... read_105322_0_0_0_0_0_1 MATURE-5P 1 0.23 0 0.00 1 0.78 aaaaa 18
..................TTTGCGATGTGTTCCcAATAT..................................................... read_177795_0_1_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 15C5
...................TTGCGATGTGTTCCTAATga..................................................... read_282573_0_0_0_1_0_0 MATURE-5P 1 0.23 0 0.00 1 0.78 ga 18
..................TTTGCGATGTGTTCCTAATtg..................................................... read_111883_0_0_0_0_0_1 MATURE-5P 1 0.23 0 0.00 1 0.78 tg 19
..................cTTGCGATGTGTTCCTAATAT..................................................... read_112920_1_0_0_0_0_0 MATURE-5P 1 0.23 1 0.33 0 0.00 20
---------- ---------- ----------
432 304 128
(70.37) (29.63)
*** OTHER ***
___________________________________________________________________________________________
GAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACA REF X 50401331 - 50401421
TTTTGCGATGTGTTCCTAATAT MATURE-5P X 50401349 - 50401460 mmu-miR-450a-5p -
___________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....................................................ATTGGGAACATTTTGCAT...................... read_247860_0_0_1_0_0_0 OTHER 1 50.00 1 50.00 0 0 18
......................................................TGGGAACATTTTGCATAAAT.................. read_72027_0_1_0_0_0_0 OTHER 1 50.00 1 50.00 0 0 20
---------- ---------- ----------
2 2 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-5P 304 128 432 99.54%
OTHER 2 0 2 0.46%
---------- ---------- ----------
306 128 434
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