[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-449a
DESCRIPTION : mmu-mir-449a MI0001649 Mus musculus miR-449a stem-loop
CHROMOSOME : 13
SPAN : 113827742 - 113827832
LENGTH : 91
SEQUENCE : CTGTGTGTGATGGCTTGGCAGTGTATTGTTAGCTGGTTGAGTATGTGAGCGGCACCAGCTAACATGCGACTGCTCTCCTATTGCACACACA
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-449a
ACCID : MI0001649
PARENT : mmu-mir-449a
CHROMOSOME : 13
START : 113827742
STOP : 113827832
OFFSET : 16..37
SEQUENCE : TGGCAGTGTATTGTTAGCTGGT
STRAND : +
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*** MATURE ***
___________________________________________________________________________________________
CTGTGTGTGATGGCTTGGCAGTGTATTGTTAGCTGGTTGAGTATGTGAGCGGCACCAGCTAACATGCGACTGCTCTCCTATTGCACACACA REF 13 113827742 - 113827832
TGGCAGTGTATTGTTAGCTGGT MATURE 13 113827758 - 113827869 mmu-miR-449a +
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................GGCAGTGTATTGTTAGCTGGT....................................................... read_345509_6_0_2_1_4_5 MATURE 18 64.29 8 61.54 10 66.67 21
................GGCAGTGTATTGTTAGCTGG........................................................ read_302958_0_0_1_1_0_0 MATURE 2 7.14 1 7.69 1 6.67 20
................GGCAGTGTATTGTTAGCTGGTa...................................................... read_235538_1_0_0_1_0_0 MATURE 2 7.14 1 7.69 1 6.67 a 21
................GGCAGTGTATTGTTAGCTGGTatt.................................................... read_365996_1_0_0_0_0_0 MATURE 1 3.57 1 7.69 0 0.00 att 21
................GGCAGTGTATTGTTAGCTGGTat..................................................... read_11619_0_0_0_0_0_1 MATURE 1 3.57 0 0.00 1 6.67 at 21
................GGCAGTGTATTGTTAGCTGtTTa..................................................... read_361690_0_0_0_0_0_1 MATURE 1 3.57 0 0.00 1 6.67 a 19T2
................GGCAGTGTATTGTTAGCTtGT....................................................... read_59953_0_1_0_0_0_0 MATURE 1 3.57 1 7.69 0 0.00 18T2
................GGCAGTGTATTGTTAGCTGGTag..................................................... read_119468_0_1_0_0_0_0 MATURE 1 3.57 1 7.69 0 0.00 ag 21
................GGCAGTGTATTGTTAGCTGtt....................................................... read_2480_0_0_0_0_1_0 MATURE 1 3.57 0 0.00 1 6.67 tt 19
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28 13 15
(46.43) (53.57)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 13 15 28 100.00%
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13 15 28
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