[BEGIN]

REFERENCE HAIRPIN
****************************************************************************************************************
ID                 : mmu-mir-431
DESCRIPTION        : mmu-mir-431 MI0001524 Mus musculus miR-431 stem-loop
CHROMOSOME         : 12
SPAN               : 110828657 - 110828747
LENGTH             : 91
SEQUENCE           : CGTCCTGCGAGGTGTCTTGCAGGCCGTCATGCAGGCCACACTGACGGTAACGTTGCAGGTCGTCTTGCAGGGCTTCTCGCAAGACGACATC
OVERHANG THRESHOLD : 75%
****************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-431
ACCID      : MI0001524
PARENT     : mmu-mir-431
CHROMOSOME : 12
START      : 110828657
STOP       : 110828747
OFFSET     : 13..33
SEQUENCE   : TGTCTTGCAGGCCGTCATGCA
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-431*
ACCID      : MI0001524
PARENT     : mmu-mir-431
CHROMOSOME : 12
START      : 110828657
STOP       : 110828747
OFFSET     : 56..77
SEQUENCE   : CAGGTCGTCTTGCAGGGCTTCT
STRAND     : +
******************************



*** MATURE ***
___________________________________________________________________________________________
CGTCCTGCGAGGTGTCTTGCAGGCCGTCATGCAGGCCACACTGACGGTAACGTTGCAGGTCGTCTTGCAGGGCTTCTCGCAAGACGACATC REF                  12                   110828657 - 110828747 
            TGTCTTGCAGGCCGTCATGCA                                                           MATURE               12                   110828670 - 110828780 mmu-miR-431          +                    
                                                       CAGGTCGTCTTGCAGGGCTTCT               MATURESTAR           12                   110828713 - 110828824 mmu-miR-431*         +                    
___________________________________________________________________________________________

                                                                                       -SEQ-                   -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.............GTCTTGCAGGCCGTCATGCA...........................................................   read_32517_0_2_0_0_0_0       MATURE            2       100.00            2       100.00            0            0                        20   
                                                                                                                                     ----------                ----------                ----------   
                                                                                                                                              2                         2                         0                                          
                                                                                                                                                                 (100.00)                    (0.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               2               0               2         100.00%
                     ----------      ----------      ----------                
                              2               0               2                



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