[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************************
ID : mmu-mir-429
DESCRIPTION : mmu-mir-429 MI0001642 Mus musculus miR-429 stem-loop
CHROMOSOME : 4
SPAN : 155428014 - 155428096
LENGTH : 83
SEQUENCE : CCTGCTGATGGATGTCTTACCAGACATGGTTAGATCTGGATGCATCTGTCTAATACTGTCTGGTAATGCCGTCCATCCACGGC
OVERHANG THRESHOLD : 75%
********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-429
ACCID : MI0001642
PARENT : mmu-mir-429
CHROMOSOME : 4
START : 155428014
STOP : 155428096
OFFSET : 51..72
SEQUENCE : TAATACTGTCTGGTAATGCCGT
STRAND : -
******************************
*** MATURE ***
___________________________________________________________________________________
CCTGCTGATGGATGTCTTACCAGACATGGTTAGATCTGGATGCATCTGTCTAATACTGTCTGGTAATGCCGTCCATCCACGGC REF 4 155428014 - 155428096
TAATACTGTCTGGTAATGCCGT MATURE 4 155428065 - 155428168 mmu-miR-429 -
___________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................AATACTGTCTGGTAATGCCGT............ read_101120_46_54_28_6_9_10 MATURE 153 59.07 128 60.66 25 52.08 21
...................................................AATACTGTCTGGTAATGCCG............. read_132507_10_18_5_4_2_2 MATURE 41 15.83 33 15.64 8 16.67 20
...................................................AATACTGTCTGGTAATGCCGTt........... read_107253_1_7_6_0_1_3 MATURE 18 6.95 14 6.64 4 8.33 t 21
...................................................AATACTGTCTGGTAATGCCGTa........... read_353984_3_5_1_0_0_0 MATURE 9 3.47 9 4.27 0 0.00 a 21
...................................................AATACTGTCTGGTAATtCCGT............ read_240884_1_0_1_0_0_1 MATURE 3 1.16 2 0.95 1 2.08 16T4
...................................................AATACTGTCTGGTAATGCCGTtt.......... read_187644_1_1_1_0_0_0 MATURE 3 1.16 3 1.42 0 0.00 tt 21
...................................................AATACTGTCTGGTAATGCCGTaa.......... read_34616_0_0_1_1_0_0 MATURE 2 0.77 1 0.47 1 2.08 aa 21
...................................................AATACTGTCTGGTAATGCtGT............ read_252751_0_0_1_0_0_1 MATURE 2 0.77 1 0.47 1 2.08 18T2
...................................................AATACTGTCTGGTAATGCCGa............ read_252362_0_2_0_0_0_0 MATURE 2 0.77 2 0.95 0 0.00 a 20
...................................................AATACTGTCTGGTAATGtCGT............ read_35198_0_1_1_0_0_0 MATURE 2 0.77 2 0.95 0 0.00 17T3
...................................................AATACTGTCTGGTAATGCCGTta.......... read_12415_0_0_1_0_1_0 MATURE 2 0.77 1 0.47 1 2.08 ta 21
...................................................AATACTGTCTGGTAATGCCt............. read_15356_0_1_0_0_1_0 MATURE 2 0.77 1 0.47 1 2.08 t 19
...................................................AATACTGTCTGGTAATGCCa............. read_248252_1_1_0_0_0_0 MATURE 2 0.77 2 0.95 0 0.00 a 19
...................................................AATACTGTCTGGTAATGCC.............. read_602_0_0_1_0_0_1 MATURE 2 0.77 1 0.47 1 2.08 19
...................................................AATACTGTCTGGTAATGCCGTtta......... read_87021_0_0_1_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 tta 21
...................................................AATACTGTCTGGTAATGC............... read_43765_1_0_0_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 18
...................................................AATACTGTCTGGTcATGCCGTt........... read_198085_0_1_0_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 t 13C7
...................................................AATACTGTCTGGTAATG................ read_143322_0_0_0_0_1_0 MATURE 1 0.39 0 0.00 1 2.08 17
...................................................AATACTGTCTGGcAATGCCGT............ read_182752_0_0_1_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 12C8
...................................................AATACTGTCTGGTAATtCCG............. read_267492_0_1_0_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 16T3
...................................................AATACTGTCTGGTAATGCag............. read_387678_0_0_0_1_0_0 MATURE 1 0.39 0 0.00 1 2.08 ag 18
...................................................AATACTGTCTGGTAATGCCGTgt.......... read_233948_0_0_1_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 gt 21
....................................................ATACTGTCTGGTAATGCCGT............ read_134960_0_0_1_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 20
...................................................AATACTGTCTGGTAgTGCCG............. read_373860_1_0_0_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 14G5
...................................................AATACTGcCTGGTAATGCCGT............ read_42646_0_0_0_0_0_1 MATURE 1 0.39 0 0.00 1 2.08 7C13
...................................................AATACTGTCTGGTAATGCCtt............ read_14815_0_1_0_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 tt 19
...................................................AATACTGTCTGGTAAcGCCGT............ read_212579_1_0_0_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 15C5
...................................................AATACcGTCTGGTAATGCCGT............ read_178387_0_0_0_0_0_1 MATURE 1 0.39 0 0.00 1 2.08 5C15
...................................................AATACTGTCTGGTAATGCCc............. read_104162_0_0_0_1_0_0 MATURE 1 0.39 0 0.00 1 2.08 c 19
...................................................AATACTGTCTGGTAATGCCGTat.......... read_105731_0_0_1_0_0_0 MATURE 1 0.39 1 0.47 0 0.00 at 21
---------- ---------- ----------
259 211 48
(81.47) (18.53)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 211 48 259 100.00%
---------- ---------- ----------
211 48 259
[END]