[BEGIN]
REFERENCE HAIRPIN
*************************************************************************************************
ID : mmu-mir-421
DESCRIPTION : mmu-mir-421 MI0005496 Mus musculus miR-421 stem-loop
CHROMOSOME : X
SPAN : 100768260 - 100768335
LENGTH : 76
SEQUENCE : CATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGT
OVERHANG THRESHOLD : 75%
*************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-421
ACCID : MI0005496
PARENT : mmu-mir-421
CHROMOSOME : X
START : 100768260
STOP : 100768335
OFFSET : 45..67
SEQUENCE : ATCAACAGACATTAATTGGGCGC
STRAND : -
******************************
*** MATURE ***
____________________________________________________________________________
CATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGT REF X 100768260 - 100768335
ATCAACAGACATTAATTGGGCGC MATURE X 100768305 - 100768402 mmu-miR-421 -
____________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............................................CAACAGACATTAATTGGGCGC.......... read_388932_0_2_0_1_0_3 MATURE 6 37.50 2 22.22 4 57.14 21
...............................................AACAGACATTAATTGGGCGCt......... read_192687_1_0_0_2_0_0 MATURE 3 18.75 1 11.11 2 28.57 t 20
.................................................CAGACATTAATTGGGCGCCTGt...... read_228281_2_1_0_0_0_0 MATURE 3 18.75 3 33.33 0 0.00 t 21
..............................................CAACAGACATTAATTGGGCG........... read_121256_0_1_0_0_0_0 MATURE 1 6.25 1 11.11 0 0.00 20
..............................................CAACAGACATTAATTGGGCGt.......... read_54510_0_0_0_0_0_1 MATURE 1 6.25 0 0.00 1 14.29 t 20
................................................ACAGACATTAATTGGGCGCCTGta..... read_320269_0_0_1_0_0_0 MATURE 1 6.25 1 11.11 0 0.00 ta 22
................................................ACAGACATTAATTGGGCGCCTGt...... read_281716_1_0_0_0_0_0 MATURE 1 6.25 1 11.11 0 0.00 t 22
---------- ---------- ----------
16 9 7
(56.25) (43.75)
*** OTHER ***
____________________________________________________________________________
CATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGT REF X 100768260 - 100768335
ATCAACAGACATTAATTGGGCGC MATURE X 100768305 - 100768402 mmu-miR-421 -
____________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........TCATTAAATGTTTGTTGAAT.............................................. read_105661_0_1_0_0_0_0 OTHER 1 50.00 1 100.00 0 0.00 20
...........TCATTAAATGTTTGTTGAATGA............................................ read_320187_0_0_0_0_1_0 OTHER 1 50.00 0 0.00 1 100.00 22
---------- ---------- ----------
2 1 1
(50.00) (50.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 9 7 16 88.89%
OTHER 1 1 2 11.11%
---------- ---------- ----------
10 8 18
[END]