[BEGIN]
REFERENCE HAIRPIN
****************************************************************************************************
ID : mmu-mir-409
DESCRIPTION : mmu-mir-409 MI0001160 Mus musculus miR-409 stem-loop
CHROMOSOME : 12
SPAN : 110981368 - 110981446
LENGTH : 79
SEQUENCE : TGGTACTCGGAGAGAGGTTACCCGAGCAACTTTGCATCTGGAGGACGAATGTTGCTCGGTGAACCCCTTTTCGGTATCA
OVERHANG THRESHOLD : 75%
****************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-409-3p
ACCID : MI0001160
PARENT : mmu-mir-409
CHROMOSOME : 12
START : 110981368
STOP : 110981446
OFFSET : 47..68
SEQUENCE : GAATGTTGCTCGGTGAACCCCT
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-409-5p
ACCID : MI0001160
PARENT : mmu-mir-409
CHROMOSOME : 12
START : 110981368
STOP : 110981446
OFFSET : 15..37
SEQUENCE : AGGTTACCCGAGCAACTTTGCAT
STRAND : +
******************************
*** MATURE-3P ***
_______________________________________________________________________________
TGGTACTCGGAGAGAGGTTACCCGAGCAACTTTGCATCTGGAGGACGAATGTTGCTCGGTGAACCCCTTTTCGGTATCA REF 12 110981368 - 110981446
GAATGTTGCTCGGTGAACCCCT MATURE-3P 12 110981415 - 110981514 mmu-miR-409-3p +
AGGTTACCCGAGCAACTTTGCAT MATURE-5P 12 110981383 - 110981483 mmu-miR-409-5p +
_______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................................................ATGTTGCTCGGTGAACCCCT............ read_11383_1_0_0_0_0_0 MATURE-3P 1 100.00 1 100.00 0 0 20
---------- ---------- ----------
1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 1 0 1 100.00%
---------- ---------- ----------
1 0 1
[END]