[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-376c
DESCRIPTION : mmu-mir-376c MI0003533 Mus musculus miR-376c stem-loop
CHROMOSOME : 12
SPAN : 110960928 - 110961013
LENGTH : 86
SEQUENCE : TTTGGTATTTAAAAGGTGGATATTCCTTCTATGTTTATGCTTTTTGTGATTAAACATAGAGGAAATTTCACGTTTTCAGTGTCAAA
OVERHANG THRESHOLD : 75%
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TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-376c
ACCID : MI0003533
PARENT : mmu-mir-376c
CHROMOSOME : 12
START : 110960928
STOP : 110961013
OFFSET : 53..73
SEQUENCE : AACATAGAGGAAATTTCACGT
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-376c*
ACCID : MI0003533
PARENT : mmu-mir-376c
CHROMOSOME : 12
START : 110960928
STOP : 110961013
OFFSET : 16..37
SEQUENCE : GTGGATATTCCTTCTATGTTTA
STRAND : +
******************************
*** MATURE ***
______________________________________________________________________________________
TTTGGTATTTAAAAGGTGGATATTCCTTCTATGTTTATGCTTTTTGTGATTAAACATAGAGGAAATTTCACGTTTTCAGTGTCAAA REF 12 110960928 - 110961013
AACATAGAGGAAATTTCACGT MATURE 12 110960981 - 110961086 mmu-miR-376c +
GTGGATATTCCTTCTATGTTTA MATURESTAR 12 110960944 - 110961050 mmu-miR-376c* +
______________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....................................................ACATAGAGGAAATTcCACGT.............. read_336414_0_1_2_0_1_1 MATURE 5 71.43 3 75.00 2 66.67 14C5
.....................................................ACATAGAGGAAATTTCACGT.............. read_154050_0_0_1_0_0_1 MATURE 2 28.57 1 25.00 1 33.33 20
---------- ---------- ----------
7 4 3
(57.14) (42.86)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 4 3 7 100.00%
---------- ---------- ----------
4 3 7
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