[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************************************
ID : mmu-mir-374
DESCRIPTION : mmu-mir-374 MI0004125 Mus musculus mir-374 stem-loop
CHROMOSOME : X
SPAN : 100768399 - 100768493
LENGTH : 95
SEQUENCE : GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCTCGTC
OVERHANG THRESHOLD : 75%
********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-374
ACCID : MI0004125
PARENT : mmu-mir-374
CHROMOSOME : X
START : 100768399
STOP : 100768493
OFFSET : 22..43
SEQUENCE : ATATAATACAACCTGCTAAGTG
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-374*
ACCID : MI0004125
PARENT : mmu-mir-374
CHROMOSOME : X
START : 100768399
STOP : 100768493
OFFSET : 59..80
SEQUENCE : GGTTGTATTATCATTGTCCGAG
STRAND : -
******************************
*** MATURE ***
_______________________________________________________________________________________________
GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCTCGTC REF X 100768399 - 100768493
ATATAATACAACCTGCTAAGTG MATURE X 100768421 - 100768536 mmu-miR-374 -
GGTTGTATTATCATTGTCCGAG MATURESTAR X 100768458 - 100768573 mmu-miR-374* -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......................cATAATACAACCTGCTAAGT...................................................... read_181163_2_1_0_0_0_0 MATURE 3 100.00 3 100.00 0 0 19
---------- ---------- ----------
3 3 0
(100.00) (0.00)
*** MATURESTAR ***
_______________________________________________________________________________________________
GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCTCGTC REF X 100768399 - 100768493
ATATAATACAACCTGCTAAGTG MATURE X 100768421 - 100768536 mmu-miR-374 -
GGTTGTATTATCATTGTCCGAG MATURESTAR X 100768458 - 100768573 mmu-miR-374* -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....................................................TAGCAGGTTGTATTATCATT....................... read_314638_1_2_3_0_1_0 MATURESTAR 7 77.78 6 85.71 1 50.00 20
.....................................................TAGCAGGTTGTATTATCAT........................ read_28216_0_0_0_0_1_0 MATURESTAR 1 11.11 0 0.00 1 50.00 19
.....................................................TAGCAGGTTGTATTATCATTt...................... read_386834_1_0_0_0_0_0 MATURESTAR 1 11.11 1 14.29 0 0.00 t 20
---------- ---------- ----------
9 7 2
(77.78) (22.22)
*** OTHER ***
_______________________________________________________________________________________________
GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCTCGTC REF X 100768399 - 100768493
ATATAATACAACCTGCTAAGTG MATURE X 100768421 - 100768536 mmu-miR-374 -
GGTTGTATTATCATTGTCCGAG MATURESTAR X 100768458 - 100768573 mmu-miR-374* -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...GAAATCCTACTCGGGTGG........................................................................... read_347530_0_0_0_1_0_0 OTHER 1 100.00 0 0 1 100.00 18
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 0 3 23.08%
MATURESTAR 7 2 9 69.23%
OTHER 0 1 1 7.69%
---------- ---------- ----------
10 3 13
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