[BEGIN]
REFERENCE HAIRPIN
****************************************************************************************************
ID : mmu-mir-369
DESCRIPTION : mmu-mir-369 MI0003535 Mus musculus miR-369 stem-loop
CHROMOSOME : 12
SPAN : 110981628 - 110981706
LENGTH : 79
SEQUENCE : GGTACTTGAAGGGAGATCGACCGTGTTATATTCGCTTGGCTGACTTCGAATAATACATGGTTGATCTTTTCTCAGTATC
OVERHANG THRESHOLD : 75%
****************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-369-3p
ACCID : MI0003535
PARENT : mmu-mir-369
CHROMOSOME : 12
START : 110981628
STOP : 110981706
OFFSET : 49..69
SEQUENCE : AATAATACATGGTTGATCTTT
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-369-5p
ACCID : MI0003535
PARENT : mmu-mir-369
CHROMOSOME : 12
START : 110981628
STOP : 110981706
OFFSET : 14..35
SEQUENCE : AGATCGACCGTGTTATATTCGC
STRAND : +
******************************
*** MATURE-3P ***
_______________________________________________________________________________
GGTACTTGAAGGGAGATCGACCGTGTTATATTCGCTTGGCTGACTTCGAATAATACATGGTTGATCTTTTCTCAGTATC REF 12 110981628 - 110981706
AATAATACATGGTTGATCTTT MATURE-3P 12 110981677 - 110981775 mmu-miR-369-3p +
AGATCGACCGTGTTATATTCGC MATURE-5P 12 110981642 - 110981741 mmu-miR-369-5p +
_______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................ATAATACATGGTTGATCTTT........... read_170172_2_1_0_0_0_2 MATURE-3P 5 62.50 3 50.00 2 100.00 20
.................................................ATAATACATGGTTGATCTT............ read_102226_0_1_1_0_0_0 MATURE-3P 2 25.00 2 33.33 0 0.00 19
................................................AATAATACATGGTTGATCTTT........... read_402951_0_1_0_0_0_0 MATURE-3P 1 12.50 1 16.67 0 0.00 21
---------- ---------- ----------
8 6 2
(75.00) (25.00)
*** MATURE-5P ***
_______________________________________________________________________________
GGTACTTGAAGGGAGATCGACCGTGTTATATTCGCTTGGCTGACTTCGAATAATACATGGTTGATCTTTTCTCAGTATC REF 12 110981628 - 110981706
AATAATACATGGTTGATCTTT MATURE-3P 12 110981677 - 110981775 mmu-miR-369-3p +
AGATCGACCGTGTTATATTCGC MATURE-5P 12 110981642 - 110981741 mmu-miR-369-5p +
_______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............GATCGACCGTGTTATATTCG.............................................. read_78539_0_1_0_0_0_0 MATURE-5P 1 100.00 1 100.00 0 0 20
---------- ---------- ----------
1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 6 2 8 88.89%
MATURE-5P 1 0 1 11.11%
---------- ---------- ----------
7 2 9
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