[BEGIN]

REFERENCE HAIRPIN
*************************************************************************************************************************************
ID                 : mmu-mir-365-2
DESCRIPTION        : mmu-mir-365-2 MI0001645 Mus musculus miR-365-2 stem-loop
CHROMOSOME         : 11
SPAN               : 79539902 - 79540013
LENGTH             : 112
SEQUENCE           : AGAGTGATCAAGGACAGCAAGAAAAATGAGGGACTTTCAGGGGCAGCTGTGTTTCCTGACTCAGTCATAATGCCCCTAAAAATCCTTATTGTTCTTGCAGTGTGCATCGGAG
OVERHANG THRESHOLD : 75%
*************************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-365
ACCID      : MI0001645
PARENT     : mmu-mir-365-2
CHROMOSOME : 11
START      : 79539902
STOP       : 79540013
OFFSET     : 68..89
SEQUENCE   : TAATGCCCCTAAAAATCCTTAT
STRAND     : +
******************************



*** MATURE ***
________________________________________________________________________________________________________________
AGAGTGATCAAGGACAGCAAGAAAAATGAGGGACTTTCAGGGGCAGCTGTGTTTCCTGACTCAGTCATAATGCCCCTAAAAATCCTTATTGTTCTTGCAGTGTGCATCGGAG REF                  11                   79539902 - 79540013  
                                                                   TAATGCCCCTAAAAATCCTTAT                        MATURE               11                   79539970 - 79540102  mmu-miR-365          +                    
________________________________________________________________________________________________________________

                                                                                                            -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
....................................................................AATGCCCCTAAAAATCCTTAT........................   read_186688_0_1_0_0_0_1       MATURE            2        50.00            1        50.00            1        50.00                        21   
....................................................................AATGCCCCTAAAAATCCTTATT.......................   read_286409_0_0_0_0_1_0       MATURE            1        25.00            0         0.00            1        50.00                        22   
....................................................................AATGCCCCTAAAAATCCTTA.........................   read_381443_0_1_0_0_0_0       MATURE            1        25.00            1        50.00            0         0.00                        20   
                                                                                                                                                           ----------                ----------                ----------   
                                                                                                                                                                    4                         2                         2                                          
                                                                                                                                                                                        (50.00)                   (50.00)                                       




*** OTHER ***
________________________________________________________________________________________________________________
AGAGTGATCAAGGACAGCAAGAAAAATGAGGGACTTTCAGGGGCAGCTGTGTTTCCTGACTCAGTCATAATGCCCCTAAAAATCCTTATTGTTCTTGCAGTGTGCATCGGAG REF                  11                   79539902 - 79540013  
                                                                   TAATGCCCCTAAAAATCCTTAT                        MATURE               11                   79539970 - 79540102  mmu-miR-365          +                    
________________________________________________________________________________________________________________

                                                                                                            -SEQ-                   -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.........AAGGACAGCAAGAAAAAT......................................................................................   read_85967_0_0_0_1_1_0        OTHER            2       100.00            0            0            2       100.00                        18   
                                                                                                                                                          ----------                ----------                ----------   
                                                                                                                                                                   2                         0                         2                                          
                                                                                                                                                                                        (0.00)                  (100.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               2               2               4          66.67%
          OTHER               0               2               2          33.33%
                     ----------      ----------      ----------                
                              2               4               6                



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