[BEGIN]
REFERENCE HAIRPIN
**************************************************************************************
ID : mmu-mir-362
DESCRIPTION : mmu-mir-362 MI0000763 Mus musculus miR-362 stem-loop
CHROMOSOME : X
SPAN : 6819108 - 6819172
LENGTH : 65
SEQUENCE : CTCGAATCCTTGGAACCTAGGTGTGAATGCTGCTTCAGTGCAACACACCTGTTCAAGGATTCAAA
OVERHANG THRESHOLD : 75%
**************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-362-3p
ACCID : MI0000763
PARENT : mmu-mir-362
CHROMOSOME : X
START : 6819108
STOP : 6819172
OFFSET : 42..63
SEQUENCE : AACACACCTGTTCAAGGATTCA
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-362-5p
ACCID : MI0000763
PARENT : mmu-mir-362
CHROMOSOME : X
START : 6819108
STOP : 6819172
OFFSET : 5..28
SEQUENCE : AATCCTTGGAACCTAGGTGTGAAT
STRAND : -
******************************
*** MATURE-3P ***
_________________________________________________________________
CTCGAATCCTTGGAACCTAGGTGTGAATGCTGCTTCAGTGCAACACACCTGTTCAAGGATTCAAA REF X 6819108 - 6819172
AACACACCTGTTCAAGGATTCA MATURE-3P X 6819150 - 6819235 mmu-miR-362-3p -
AATCCTTGGAACCTAGGTGTGAAT MATURE-5P X 6819113 - 6819200 mmu-miR-362-5p -
_________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................................ACACACCTGTTCAAGGATTC.... read_48317_3_7_3_3_9_5 MATURE-3P 30 29.13 13 27.08 17 30.91 20
..........................................ACACACCTGTTCAAGGATTCA... read_287514_2_6_3_1_10_5 MATURE-3P 27 26.21 11 22.92 16 29.09 21
..........................................ACACACCTGTTCAAGGATT..... read_204786_2_4_5_2_2_4 MATURE-3P 19 18.45 11 22.92 8 14.55 19
..........................................ACACACCTGTTCAAGGATTCt... read_101645_2_3_1_0_2_1 MATURE-3P 9 8.74 6 12.50 3 5.45 t 20
..........................................ACACACCTGTTCAAGGATTCAA.. read_270581_1_2_0_2_0_1 MATURE-3P 6 5.83 3 6.25 3 5.45 22
..........................................ACACACCTGTTCAAGGATTCAt.. read_187481_0_0_0_0_1_1 MATURE-3P 2 1.94 0 0.00 2 3.64 t 21
..........................................ACACACCTGTTCAAGGATTCAc.. read_46821_0_0_0_1_0_0 MATURE-3P 1 0.97 0 0.00 1 1.82 c 21
..........................................ACACACCTGTTCtAGGATTC.... read_265009_1_0_0_0_0_0 MATURE-3P 1 0.97 1 2.08 0 0.00 12T7
..........................................ACACACCTGTTCcAGGATTC.... read_321947_0_1_0_0_0_0 MATURE-3P 1 0.97 1 2.08 0 0.00 12C7
..........................................ACACACCTGTTCAAGGAT...... read_8902_0_0_0_0_1_0 MATURE-3P 1 0.97 0 0.00 1 1.82 18
..........................................ACACACCTGTTCAAGGATTt.... read_256495_0_0_0_0_0_1 MATURE-3P 1 0.97 0 0.00 1 1.82 t 19
..........................................ACACACCTGTTCAAGGtTTCA... read_51218_0_1_0_0_0_0 MATURE-3P 1 0.97 1 2.08 0 0.00 16T4
..........................................ACACACCTGTTCAAGGATTCtgt. read_217465_0_0_0_1_0_0 MATURE-3P 1 0.97 0 0.00 1 1.82 tgt 20
..........................................ACACACCTGTTCAAGGATTCAct. read_139209_0_0_0_1_0_0 MATURE-3P 1 0.97 0 0.00 1 1.82 ct 21
..........................................ACACACCTGTTCAAGtATTCA... read_275632_0_0_0_0_0_1 MATURE-3P 1 0.97 0 0.00 1 1.82 15T5
..........................................ACACACCTGTTCAAGcATTCA... read_361136_1_0_0_0_0_0 MATURE-3P 1 0.97 1 2.08 0 0.00 15C5
---------- ---------- ----------
103 48 55
(46.60) (53.40)
*** MATURE-5P ***
_________________________________________________________________
CTCGAATCCTTGGAACCTAGGTGTGAATGCTGCTTCAGTGCAACACACCTGTTCAAGGATTCAAA REF X 6819108 - 6819172
AACACACCTGTTCAAGGATTCA MATURE-3P X 6819150 - 6819235 mmu-miR-362-3p -
AATCCTTGGAACCTAGGTGTGAAT MATURE-5P X 6819113 - 6819200 mmu-miR-362-5p -
_________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....ATCCTTGGAACCTAGGTGTGA........................................ read_172886_33_37_25_13_21_25 MATURE-5P 154 44.64 95 42.04 59 49.58 21
.....ATCCTTGGAACCTAGGTGTG......................................... read_148791_17_17_5_1_3_0 MATURE-5P 43 12.46 39 17.26 4 3.36 20
.....ATCCTTGGAACCTAGGTGTGAAT...................................... read_172639_11_6_0_6_3_1 MATURE-5P 27 7.83 17 7.52 10 8.40 23
.....ATCCTTGGAACCTAGGTGTGt........................................ read_31557_10_8_4_3_1_0 MATURE-5P 26 7.54 22 9.73 4 3.36 t 20
.....ATCCTTGGAACCTAGGTGT.......................................... read_68932_4_0_1_2_5_4 MATURE-5P 16 4.64 5 2.21 11 9.24 19
.....ATCCTTGGAACCTAGGTGTGAA....................................... read_66548_2_4_5_1_2_1 MATURE-5P 15 4.35 11 4.87 4 3.36 22
.....ATCCTTGGAACCTAGGTtTGA........................................ read_355719_0_1_1_1_2_1 MATURE-5P 6 1.74 2 0.88 4 3.36 17T3
.....ATCCTTGGAACCTAGGTGTGAAa...................................... read_334102_0_2_1_0_1_1 MATURE-5P 5 1.45 3 1.33 2 1.68 a 22
.....ATCCTTGGAACCTAGGTGTGAt....................................... read_383938_2_0_0_0_1_2 MATURE-5P 5 1.45 2 0.88 3 2.52 t 21
.....ATCCTTGGAACCTAGGTGTGg........................................ read_205901_1_1_0_0_0_1 MATURE-5P 3 0.87 2 0.88 1 0.84 g 20
.....ATCCTTGGAACCTAGGTGTGAATG..................................... read_158181_0_0_1_0_1_1 MATURE-5P 3 0.87 1 0.44 2 1.68 24
.....ATCCTTGGAACCTAaGTGTGA........................................ read_36817_2_0_1_0_0_0 MATURE-5P 3 0.87 3 1.33 0 0.00 14A6
.....ATCCTTGGAACCTAGGTGTGta....................................... read_141260_0_1_1_0_1_0 MATURE-5P 3 0.87 2 0.88 1 0.84 ta 20
.....ATCCTTGGAACCTAGtTGTGA........................................ read_318017_0_2_0_0_0_0 MATURE-5P 2 0.58 2 0.88 0 0.00 15T5
.....ATCCTTGGAACCTAGGTGa.......................................... read_153790_2_0_0_0_0_0 MATURE-5P 2 0.58 2 0.88 0 0.00 a 18
.....ATCCTTGGAACCTAGtTGTGAA....................................... read_342857_1_1_0_0_0_0 MATURE-5P 2 0.58 2 0.88 0 0.00 15T6
.....ATCCTTGGAACCTAGGTGTGc........................................ read_145253_1_0_0_0_0_1 MATURE-5P 2 0.58 1 0.44 1 0.84 c 20
.....ATCCTTGGAACCTAGGTGTGAATGC.................................... read_366604_0_0_0_0_1_1 MATURE-5P 2 0.58 0 0.00 2 1.68 25
.....ATCCTTGGAACCTAGGTGTta........................................ read_311938_0_0_0_0_1_1 MATURE-5P 2 0.58 0 0.00 2 1.68 ta 19
.....ATCCTTGGAACCTAGGcGTGAATGC.................................... read_310396_0_0_0_0_1_0 MATURE-5P 1 0.29 0 0.00 1 0.84 16C8
.....ATCCTTGGAACCTAtGTGTGAAT...................................... read_196723_1_0_0_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 14T8
.....ATCCTTGGAACCTAGGTGTt......................................... read_19514_0_1_0_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 t 19
.....ATCCTTGGAACCTAGGTGTtt........................................ read_272043_0_0_0_0_0_1 MATURE-5P 1 0.29 0 0.00 1 0.84 tt 19
.....ATCCTTGGAACCTAGGcGTGA........................................ read_214429_0_0_0_0_1_0 MATURE-5P 1 0.29 0 0.00 1 0.84 16C4
.....ATCCTTGGAACCTAGGaGTGA........................................ read_381500_0_1_0_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 16A4
.....ATCCTTGGAACCTAGGTGTGga....................................... read_95392_0_1_0_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 ga 20
.....ATCCTTcGAACCTAGGTGTGA........................................ read_110043_0_0_1_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 6C14
.....ATCCTTGGAACCTAaGTGTG......................................... read_45755_1_0_0_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 14A5
.....ATCCTTGGAACCTAGGTGaGA........................................ read_263188_0_0_1_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 18A2
.....ATCCTTGGAACCTAGGTG........................................... read_295359_0_0_0_1_0_0 MATURE-5P 1 0.29 0 0.00 1 0.84 18
.....ATCCTTGGAgCCTAGGTGTGA........................................ read_212624_0_0_0_0_1_0 MATURE-5P 1 0.29 0 0.00 1 0.84 9G11
.....ATCCTTGGAACCTAGGTGTGAATGt.................................... read_208306_1_0_0_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 t 24
.....ATCCTTGGAACCTAGGTGcg......................................... read_150107_0_0_1_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 cg 18
.....ATaCTTGGAACCTAGGTGTGAt....................................... read_289697_0_0_1_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 t 2A18
.....ATCCTTGGAACCTAGGcGTGAA....................................... read_298548_0_1_0_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 16C5
.....ATCCTTGGAACCTAGGTGggt........................................ read_280560_0_1_0_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 ggt 18
.....ATCCTTGGgACCTAGGTGTG......................................... read_366842_0_0_1_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 8G11
.....ATCCTTGGAACCTAGGTGTGtt....................................... read_38760_0_0_0_0_1_0 MATURE-5P 1 0.29 0 0.00 1 0.84 tt 20
.....ATCCTTGGAACCTAaGTGTGAA....................................... read_209492_1_0_0_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 14A7
.....ATCCTTGGAACCTgGGTGTG......................................... read_128169_0_0_1_0_0_0 MATURE-5P 1 0.29 1 0.44 0 0.00 13G6
........CTTGGAACCTAGGTGTGAATGt.................................... read_21202_0_0_0_1_0_0 MATURE-5P 1 0.29 0 0.00 1 0.84 t 21
.....ATCCTTGGAACCTAGGgGTGA........................................ read_181082_0_0_0_0_0_1 MATURE-5P 1 0.29 0 0.00 1 0.84 16G4
.....ATCCTTGGAACCTAGGT............................................ read_140906_0_0_0_0_1_0 MATURE-5P 1 0.29 0 0.00 1 0.84 17
---------- ---------- ----------
345 226 119
(65.51) (34.49)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 48 55 103 22.99%
MATURE-5P 226 119 345 77.01%
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274 174 448
[END]