[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************************
ID : mmu-mir-328
DESCRIPTION : mmu-mir-328 MI0000603 Mus musculus miR-328 stem-loop
CHROMOSOME : 8
SPAN : 107832264 - 107832360
LENGTH : 97
SEQUENCE : CTGTCTCGGAGCCTGGGGCAGGGGGGCAGGAGGGGCTCAGGGAGAAAGTATCTACAGCCCCTGGCCCTCTCTGCCCTTCCGTCCCCTGTCCCCAAGT
OVERHANG THRESHOLD : 75%
**********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-328
ACCID : MI0000603
PARENT : mmu-mir-328
CHROMOSOME : 8
START : 107832264
STOP : 107832360
OFFSET : 61..82
SEQUENCE : CTGGCCCTCTCTGCCCTTCCGT
STRAND : -
******************************
*** MATURE ***
_________________________________________________________________________________________________
CTGTCTCGGAGCCTGGGGCAGGGGGGCAGGAGGGGCTCAGGGAGAAAGTATCTACAGCCCCTGGCCCTCTCTGCCCTTCCGTCCCCTGTCCCCAAGT REF 8 107832264 - 107832360
CTGGCCCTCTCTGCCCTTCCGT MATURE 8 107832325 - 107832442 mmu-miR-328 -
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................................TGGCCCTCTCTGCCCTTCCGT................ read_360393_8_9_1_4_5_6 MATURE 33 33.67 18 28.57 15 42.86 21
.............................................................TGGCCCTCTCTGCCCTTCCGTt............... read_352724_8_5_1_1_0_2 MATURE 17 17.35 14 22.22 3 8.57 t 21
.............................................................TGGCCCTCTCTGCCCTTCCGTtt.............. read_382389_1_1_0_1_2_0 MATURE 5 5.10 2 3.17 3 8.57 tt 21
.............................................................TGGCCCTCTCTGCCCTTCCtt................ read_388419_2_1_0_0_1_0 MATURE 4 4.08 3 4.76 1 2.86 tt 19
.............................................................TGGCCCTCTCTGCCCTTCCttt............... read_395761_2_0_0_0_1_0 MATURE 3 3.06 2 3.17 1 2.86 ttt 19
.............................................................TGGCCCTCTCTGCCCTTCCGTa............... read_342841_1_1_1_0_0_0 MATURE 3 3.06 3 4.76 0 0.00 a 21
..............................................................GGCCCTCTCTGCCCTTCCGTt............... read_137996_1_1_1_0_0_0 MATURE 3 3.06 3 4.76 0 0.00 t 20
.............................................................TGGCCCTCTCTGCCCTTCCG................. read_408485_1_0_0_1_0_0 MATURE 2 2.04 1 1.59 1 2.86 20
.............................................................TGGCCCTCTCTGCCCTTCCGa................ read_121036_0_0_0_0_2_0 MATURE 2 2.04 0 0.00 2 5.71 a 20
.............................................................TGGCCCTCTCTGCCCTTCCGTat.............. read_309813_1_0_0_1_0_0 MATURE 2 2.04 1 1.59 1 2.86 at 21
.............................................................TGGCCCTCTCTGCCCTTCCGc................ read_287485_0_2_0_0_0_0 MATURE 2 2.04 2 3.17 0 0.00 c 20
.................................................................CCTCTCTGCCCTTCCGT................ read_341765_0_0_0_0_0_2 MATURE 2 2.04 0 0.00 2 5.71 17
............................................................CTGGCCCTCTCTGCCCTTCCGT................ read_276199_0_2_0_0_0_0 MATURE 2 2.04 2 3.17 0 0.00 22
.............................................................TGGCCCTCTCTGCCaTTCCGT................ read_407115_1_0_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 14A6
.............................................................TGGCCCTCTCTGCCCTTCCGTttc............. read_278939_0_0_0_1_0_0 MATURE 1 1.02 0 0.00 1 2.86 ttc 21
.............................................................cGGCCCTCTCTGCCCTTCCGT................ read_204767_0_0_0_0_0_1 MATURE 1 1.02 0 0.00 1 2.86 20
.............................................................TGGCCCTCTCTGCCCTTCCGTCt.............. read_263470_1_0_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 t 22
.............................................................TGGCCCTtTCTGCCCTTCCGT................ read_353228_0_0_0_0_0_1 MATURE 1 1.02 0 0.00 1 2.86 7T13
.............................................................TGGCCCTCTCTGCCaTTCCGTt............... read_384541_1_0_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 t 14A6
..............................................................GGCCCTCTCTGCCCTTCCGTa............... read_57464_0_0_0_0_1_0 MATURE 1 1.02 0 0.00 1 2.86 a 20
.............................................................TGGCCCTCTCTaCCCTTCCGT................ read_225784_0_1_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 11A9
.............................................................TGGCCCTCTCTGCCCTTCC.................. read_59917_0_0_1_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 19
.............................................................TGGCCCTCTCTGCCCTTCCtttt.............. read_260287_0_1_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 tttt 19
.............................................................TGGCCCTCTCTGCCCTTCtGT................ read_36953_0_1_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 18T2
.............................................................TGGCCCTCTCTGCCCTTC................... read_179672_0_0_0_0_1_0 MATURE 1 1.02 0 0.00 1 2.86 18
............................................................CTGGCCCTCTCTGCCCTTCCGTt............... read_374823_1_0_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 t 22
.............................................................TGGCCCTCTCTGCCCTTCgGT................ read_85466_0_0_0_1_0_0 MATURE 1 1.02 0 0.00 1 2.86 18G2
.............................................................cGGCCCTCTCTGCCCTTCCGTt............... read_225815_1_0_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 t 20
.............................................................TGGCCCTCTCTGCCCTTCCGaat.............. read_341939_1_0_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 aat 20
.............................................................TGcCCCTCTCTGCCCTTCCGTt............... read_406798_1_0_0_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 t 2C18
.............................................................TGGCCCTCTCTGCCCTTCCttta.............. read_175471_0_0_1_0_0_0 MATURE 1 1.02 1 1.59 0 0.00 ttta 19
---------- ---------- ----------
98 63 35
(64.29) (35.71)
*** OTHER ***
_________________________________________________________________________________________________
CTGTCTCGGAGCCTGGGGCAGGGGGGCAGGAGGGGCTCAGGGAGAAAGTATCTACAGCCCCTGGCCCTCTCTGCCCTTCCGTCCCCTGTCCCCAAGT REF 8 107832264 - 107832360
CTGGCCCTCTCTGCCCTTCCGT MATURE 8 107832325 - 107832442 mmu-miR-328 -
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..GTCTCGGAGCCTGGGGCA.............................................................................. read_382210_2_0_0_0_0_2 OTHER 4 36.36 2 28.57 2 50.00 18
...........................................GAAAGTATCTACAGCCC...................................... read_206066_1_0_1_0_0_1 OTHER 3 27.27 2 28.57 1 25.00 17
.TGTCTCGGAGCCTGGGGCA.............................................................................. read_237576_1_1_0_0_0_0 OTHER 2 18.18 2 28.57 0 0.00 19
.....................GGGGGCAGGAGGGGCTCAGGG........................................................ read_333655_0_1_0_0_1_0 OTHER 2 18.18 1 14.29 1 25.00 21
---------- ---------- ----------
11 7 4
(63.64) (36.36)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 63 35 98 89.91%
OTHER 7 4 11 10.09%
---------- ---------- ----------
70 39 109
[END]