[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************************************
ID : mmu-mir-326
DESCRIPTION : mmu-mir-326 MI0000598 Mus musculus miR-326 stem-loop
CHROMOSOME : 7
SPAN : 106700779 - 106700873
LENGTH : 95
SEQUENCE : CTCATCTGTCTGTTGGGCTGGGGGCAGGGCCTTTGTGAAGGCGGGTTATGCTCAGATCGCCTCTGGGCCCTTCCTCCAGTCCCGAGGCAGATTTA
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-326
ACCID : MI0000598
PARENT : mmu-mir-326
CHROMOSOME : 7
START : 106700779
STOP : 106700873
OFFSET : 60..80
SEQUENCE : CCTCTGGGCCCTTCCTCCAGT
STRAND : +
******************************
*** MATURE ***
_______________________________________________________________________________________________
CTCATCTGTCTGTTGGGCTGGGGGCAGGGCCTTTGTGAAGGCGGGTTATGCTCAGATCGCCTCTGGGCCCTTCCTCCAGTCCCGAGGCAGATTTA REF 7 106700779 - 106700873
CCTCTGGGCCCTTCCTCCAGT MATURE 7 106700839 - 106700953 mmu-miR-326 +
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............................................................CTCTGGGCCCTTCCTCCAGT................ read_240141_14_14_5_11_15_17 MATURE 76 82.61 33 78.57 43 86.00 20
............................................................CTCTGGGCCCTTCCTCCAtt................ read_252899_0_0_0_0_1_1 MATURE 2 2.17 0 0.00 2 4.00 tt 18
............................................................CTCTGGGCCCTTCCTCCAt................. read_320700_0_1_0_0_1_0 MATURE 2 2.17 1 2.38 1 2.00 t 18
............................................................CTCTGGGCCCTTCCTCCAGTa............... read_33686_1_0_0_0_1_0 MATURE 2 2.17 1 2.38 1 2.00 a 20
............................................................CTCTGGGCCCTTCCTCCAGa................ read_162289_0_0_1_0_0_1 MATURE 2 2.17 1 2.38 1 2.00 a 19
............................................................CTCTGGGCCCTTCCTCCAGTt............... read_192325_0_1_0_1_0_0 MATURE 2 2.17 1 2.38 1 2.00 t 20
............................................................CTCTGGGCCCTTCCaCCAGT................ read_298499_1_0_0_0_0_0 MATURE 1 1.09 1 2.38 0 0.00 14A5
............................................................CTCTGGGCCCTTCtTCCAGT................ read_376157_1_0_0_0_0_0 MATURE 1 1.09 1 2.38 0 0.00 13T6
............................................................CTCTGGGCCCTTCCTCCAGTaa.............. read_148282_0_0_0_0_0_1 MATURE 1 1.09 0 0.00 1 2.00 aa 20
.............................................................TCTGGGCCCTTCCTCCAGTt............... read_211706_0_1_0_0_0_0 MATURE 1 1.09 1 2.38 0 0.00 t 19
............................................................CTCTGGGCCCTTCCTCCAtc................ read_400697_0_0_1_0_0_0 MATURE 1 1.09 1 2.38 0 0.00 tc 18
..............................................................CTGGGCCCTTCCTCCAGT................ read_176_0_1_0_0_0_0 MATURE 1 1.09 1 2.38 0 0.00 18
---------- ---------- ----------
92 42 50
(45.65) (54.35)
*** OTHER ***
_______________________________________________________________________________________________
CTCATCTGTCTGTTGGGCTGGGGGCAGGGCCTTTGTGAAGGCGGGTTATGCTCAGATCGCCTCTGGGCCCTTCCTCCAGTCCCGAGGCAGATTTA REF 7 106700779 - 106700873
CCTCTGGGCCCTTCCTCCAGT MATURE 7 106700839 - 106700953 mmu-miR-326 +
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
CTCATCTGTCTGTTGGGCT............................................................................. read_111631_0_1_0_0_0_0 OTHER 1 100.00 1 100.00 0 0 19
---------- ---------- ----------
1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 42 50 92 98.92%
OTHER 1 0 1 1.08%
---------- ---------- ----------
43 50 93
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