[BEGIN]

REFERENCE HAIRPIN
*******************************************************************************************
ID                 : mmu-mir-32
DESCRIPTION        : mmu-mir-32 MI0000691 Mus musculus miR-32 stem-loop
CHROMOSOME         : 4
SPAN               : 56908101 - 56908170
LENGTH             : 70
SEQUENCE           : GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC
OVERHANG THRESHOLD : 75%
*******************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-32
ACCID      : MI0000691
PARENT     : mmu-mir-32
CHROMOSOME : 4
START      : 56908101
STOP       : 56908170
OFFSET     : 6..27
SEQUENCE   : TATTGCACATTACTAAGTTGCA
STRAND     : -
******************************



*** MATURE ***
______________________________________________________________________
GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC REF                  4                    56908101 - 56908170  
     TATTGCACATTACTAAGTTGCA                                            MATURE               4                    56908107 - 56908197  mmu-miR-32           -                    
______________________________________________________________________

                                                                  -SEQ-                          -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
......ATTGCACATTACTAAGTTGC.............................................   read_246554_37_62_41_14_19_26       MATURE          199        37.98          140        42.81           59        29.95                        20   
......ATTGCACATTACTAAGTTG..............................................    read_368575_27_33_26_12_9_17       MATURE          124        23.66           86        26.30           38        19.29                        19   
......ATTGCACATTACTAAGTTGCA............................................   read_204813_15_16_27_15_17_27       MATURE          117        22.33           58        17.74           59        29.95                        21   
......ATTGCACATTACTAAGTTGCAT...........................................         read_328709_8_4_2_4_6_8       MATURE           32         6.11           14         4.28           18         9.14                        22   
......ATTGCACATTACTAAGTTGa.............................................         read_138065_0_3_2_2_1_1       MATURE            9         1.72            5         1.53            4         2.03            a           19   
......ATTGCACATTACTAAGTT...............................................         read_101019_1_2_0_1_1_0       MATURE            5         0.95            3         0.92            2         1.02                        18   
......ATTGCACATTACTAAGTTtCA............................................          read_19617_1_1_0_0_2_0       MATURE            4         0.76            2         0.61            2         1.02                      18T2   
......ATTGCACATTACTAAtTTGC.............................................          read_17616_0_0_2_0_1_0       MATURE            3         0.57            2         0.61            1         0.51                      15T4   
......ATTGCACATTACTAAGTTGCAa...........................................          read_88569_0_0_0_1_1_1       MATURE            3         0.57            0         0.00            3         1.52            a           21   
......ATTGCACATTACTAAGTTGCt............................................         read_333447_0_1_1_0_0_0       MATURE            2         0.38            2         0.61            0         0.00            t           20   
......ATTGCACATTACTAAtTTGCA............................................         read_327450_0_0_1_0_0_1       MATURE            2         0.38            1         0.31            1         0.51                      15T5   
......ATTGCACATTACTAAGTTtCAT...........................................         read_223513_0_0_1_0_0_1       MATURE            2         0.38            1         0.31            1         0.51                      18T3   
......ATTGCACATTACTAAGTTGt.............................................         read_308525_0_1_0_0_0_1       MATURE            2         0.38            1         0.31            1         0.51            t           19   
..........CACATTACTAAGTTGCA............................................         read_116961_0_0_0_0_0_2       MATURE            2         0.38            0         0.00            2         1.02                        17   
......ATTGCACATTACTAcGTTGCA............................................         read_396067_1_0_0_0_0_0       MATURE            1         0.19            1         0.31            0         0.00                      14C6   
......ATTGCACATTACTgAGTTGCA............................................         read_274982_0_1_0_0_0_0       MATURE            1         0.19            1         0.31            0         0.00                      13G7   
......ATTGCACATTACTAcGTTGC.............................................         read_269635_0_0_0_0_1_0       MATURE            1         0.19            0         0.00            1         0.51                      14C5   
......ATTGCgCATTACTAAGTTGC.............................................         read_190486_1_0_0_0_0_0       MATURE            1         0.19            1         0.31            0         0.00                      5G14   
......ATTGCACATTACTAAGTTtgca...........................................          read_37115_0_1_0_0_0_0       MATURE            1         0.19            1         0.31            0         0.00         tgca           18   
.........GCACATTACTAAGTTGCAT...........................................         read_324088_0_0_0_0_1_0       MATURE            1         0.19            0         0.00            1         0.51                        19   
......ATTGCACATcACTAAGTTGCA............................................           read_2991_0_1_0_0_0_0       MATURE            1         0.19            1         0.31            0         0.00                      9C11   
......ATTGgACATTACTAAGTTGC.............................................          read_61885_0_0_1_0_0_0       MATURE            1         0.19            1         0.31            0         0.00                      4G15   
......ATTGCACATTACTAAGT................................................         read_382407_0_0_0_0_1_0       MATURE            1         0.19            0         0.00            1         0.51                        17   
......ATTGCACATTACTAAGTTt..............................................         read_287002_0_0_1_0_0_0       MATURE            1         0.19            1         0.31            0         0.00            t           18   
......ATTtCACATTACTAAGTTGCAT...........................................         read_344069_0_0_0_0_0_1       MATURE            1         0.19            0         0.00            1         0.51                      3T18   
......ATTGCACATTACTAgGTTGCA............................................         read_368319_1_0_0_0_0_0       MATURE            1         0.19            1         0.31            0         0.00                      14G6   
......ATTGCACATTACTAAGTTtc.............................................         read_157302_0_0_0_0_1_0       MATURE            1         0.19            0         0.00            1         0.51           tc           18   
........TGCACATTACTAAGTTG..............................................         read_102587_1_0_0_0_0_0       MATURE            1         0.19            1         0.31            0         0.00                        17   
......ATTGCACATTACTAAcTTGC.............................................         read_310995_1_0_0_0_0_0       MATURE            1         0.19            1         0.31            0         0.00                      15C4   
......ATTGCACATTACTAAGTTa..............................................         read_411777_0_0_1_0_0_0       MATURE            1         0.19            1         0.31            0         0.00            a           18   
......ATTGCACATTACTAAtTTGCAT...........................................         read_265820_0_0_1_0_0_0       MATURE            1         0.19            1         0.31            0         0.00                      15T6   
......ATTGaACATTACTAAGTTGCA............................................         read_132069_0_0_0_0_0_1       MATURE            1         0.19            0         0.00            1         0.51                      4A16   
                                                                                                                       ----------                ----------                ----------   
                                                                                                                              524                       327                       197                                          
                                                                                                                                                    (62.40)                   (37.60)                                       




*** OTHER ***
______________________________________________________________________
GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC REF                  4                    56908101 - 56908170  
     TATTGCACATTACTAAGTTGCA                                            MATURE               4                    56908107 - 56908197  mmu-miR-32           -                    
______________________________________________________________________

                                                                  -SEQ-                       -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...............................................AATTTAGTGTGTGTGATATT....       read_91420_1_1_0_0_1_1        OTHER            4        26.67            2        20.00            2        40.00                        20   
...............................................AATTTAGTGTGTGTGATAT.....       read_38032_1_0_0_1_1_0        OTHER            3        20.00            1        10.00            2        40.00                        19   
.............................................GCAATTTAGTGTGTGTGATAa.....      read_354627_1_1_0_0_0_0        OTHER            2        13.33            2        20.00            0         0.00            a           20   
..............................................CAATTTAGTGTGTGTGATATT....       read_82870_1_0_0_0_0_0        OTHER            1         6.67            1        10.00            0         0.00                        21   
...............................................AATTTAGTGTGTGTGATATTT...      read_206443_0_1_0_0_0_0        OTHER            1         6.67            1        10.00            0         0.00                        21   
...............................................AATTTAGTGTGTGTGATATc....       read_67957_1_0_0_0_0_0        OTHER            1         6.67            1        10.00            0         0.00            c           19   
.............................................GCAATTTAGTGTGTGTGATAaa....       read_21581_0_1_0_0_0_0        OTHER            1         6.67            1        10.00            0         0.00           aa           20   
.............................................GCAATTTAGTGTGTGTGATAT.....      read_271782_0_0_0_0_0_1        OTHER            1         6.67            0         0.00            1        20.00                        21   
...............................................AATTTAGTGTGTGTGATATat...       read_32838_0_0_1_0_0_0        OTHER            1         6.67            1        10.00            0         0.00           at           19   
                                                                                                                    ----------                ----------                ----------   
                                                                                                                            15                        10                         5                                          
                                                                                                                                                 (66.67)                   (33.33)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE             327             197             524          97.22%
          OTHER              10               5              15           2.78%
                     ----------      ----------      ----------                
                            337             202             539                



[END]
