[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-32
DESCRIPTION : mmu-mir-32 MI0000691 Mus musculus miR-32 stem-loop
CHROMOSOME : 4
SPAN : 56908101 - 56908170
LENGTH : 70
SEQUENCE : GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-32
ACCID : MI0000691
PARENT : mmu-mir-32
CHROMOSOME : 4
START : 56908101
STOP : 56908170
OFFSET : 6..27
SEQUENCE : TATTGCACATTACTAAGTTGCA
STRAND : -
******************************
*** MATURE ***
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GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC REF 4 56908101 - 56908170
TATTGCACATTACTAAGTTGCA MATURE 4 56908107 - 56908197 mmu-miR-32 -
______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......ATTGCACATTACTAAGTTGC............................................. read_246554_37_62_41_14_19_26 MATURE 199 37.98 140 42.81 59 29.95 20
......ATTGCACATTACTAAGTTG.............................................. read_368575_27_33_26_12_9_17 MATURE 124 23.66 86 26.30 38 19.29 19
......ATTGCACATTACTAAGTTGCA............................................ read_204813_15_16_27_15_17_27 MATURE 117 22.33 58 17.74 59 29.95 21
......ATTGCACATTACTAAGTTGCAT........................................... read_328709_8_4_2_4_6_8 MATURE 32 6.11 14 4.28 18 9.14 22
......ATTGCACATTACTAAGTTGa............................................. read_138065_0_3_2_2_1_1 MATURE 9 1.72 5 1.53 4 2.03 a 19
......ATTGCACATTACTAAGTT............................................... read_101019_1_2_0_1_1_0 MATURE 5 0.95 3 0.92 2 1.02 18
......ATTGCACATTACTAAGTTtCA............................................ read_19617_1_1_0_0_2_0 MATURE 4 0.76 2 0.61 2 1.02 18T2
......ATTGCACATTACTAAtTTGC............................................. read_17616_0_0_2_0_1_0 MATURE 3 0.57 2 0.61 1 0.51 15T4
......ATTGCACATTACTAAGTTGCAa........................................... read_88569_0_0_0_1_1_1 MATURE 3 0.57 0 0.00 3 1.52 a 21
......ATTGCACATTACTAAGTTGCt............................................ read_333447_0_1_1_0_0_0 MATURE 2 0.38 2 0.61 0 0.00 t 20
......ATTGCACATTACTAAtTTGCA............................................ read_327450_0_0_1_0_0_1 MATURE 2 0.38 1 0.31 1 0.51 15T5
......ATTGCACATTACTAAGTTtCAT........................................... read_223513_0_0_1_0_0_1 MATURE 2 0.38 1 0.31 1 0.51 18T3
......ATTGCACATTACTAAGTTGt............................................. read_308525_0_1_0_0_0_1 MATURE 2 0.38 1 0.31 1 0.51 t 19
..........CACATTACTAAGTTGCA............................................ read_116961_0_0_0_0_0_2 MATURE 2 0.38 0 0.00 2 1.02 17
......ATTGCACATTACTAcGTTGCA............................................ read_396067_1_0_0_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 14C6
......ATTGCACATTACTgAGTTGCA............................................ read_274982_0_1_0_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 13G7
......ATTGCACATTACTAcGTTGC............................................. read_269635_0_0_0_0_1_0 MATURE 1 0.19 0 0.00 1 0.51 14C5
......ATTGCgCATTACTAAGTTGC............................................. read_190486_1_0_0_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 5G14
......ATTGCACATTACTAAGTTtgca........................................... read_37115_0_1_0_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 tgca 18
.........GCACATTACTAAGTTGCAT........................................... read_324088_0_0_0_0_1_0 MATURE 1 0.19 0 0.00 1 0.51 19
......ATTGCACATcACTAAGTTGCA............................................ read_2991_0_1_0_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 9C11
......ATTGgACATTACTAAGTTGC............................................. read_61885_0_0_1_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 4G15
......ATTGCACATTACTAAGT................................................ read_382407_0_0_0_0_1_0 MATURE 1 0.19 0 0.00 1 0.51 17
......ATTGCACATTACTAAGTTt.............................................. read_287002_0_0_1_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 t 18
......ATTtCACATTACTAAGTTGCAT........................................... read_344069_0_0_0_0_0_1 MATURE 1 0.19 0 0.00 1 0.51 3T18
......ATTGCACATTACTAgGTTGCA............................................ read_368319_1_0_0_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 14G6
......ATTGCACATTACTAAGTTtc............................................. read_157302_0_0_0_0_1_0 MATURE 1 0.19 0 0.00 1 0.51 tc 18
........TGCACATTACTAAGTTG.............................................. read_102587_1_0_0_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 17
......ATTGCACATTACTAAcTTGC............................................. read_310995_1_0_0_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 15C4
......ATTGCACATTACTAAGTTa.............................................. read_411777_0_0_1_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 a 18
......ATTGCACATTACTAAtTTGCAT........................................... read_265820_0_0_1_0_0_0 MATURE 1 0.19 1 0.31 0 0.00 15T6
......ATTGaACATTACTAAGTTGCA............................................ read_132069_0_0_0_0_0_1 MATURE 1 0.19 0 0.00 1 0.51 4A16
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524 327 197
(62.40) (37.60)
*** OTHER ***
______________________________________________________________________
GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC REF 4 56908101 - 56908170
TATTGCACATTACTAAGTTGCA MATURE 4 56908107 - 56908197 mmu-miR-32 -
______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................AATTTAGTGTGTGTGATATT.... read_91420_1_1_0_0_1_1 OTHER 4 26.67 2 20.00 2 40.00 20
...............................................AATTTAGTGTGTGTGATAT..... read_38032_1_0_0_1_1_0 OTHER 3 20.00 1 10.00 2 40.00 19
.............................................GCAATTTAGTGTGTGTGATAa..... read_354627_1_1_0_0_0_0 OTHER 2 13.33 2 20.00 0 0.00 a 20
..............................................CAATTTAGTGTGTGTGATATT.... read_82870_1_0_0_0_0_0 OTHER 1 6.67 1 10.00 0 0.00 21
...............................................AATTTAGTGTGTGTGATATTT... read_206443_0_1_0_0_0_0 OTHER 1 6.67 1 10.00 0 0.00 21
...............................................AATTTAGTGTGTGTGATATc.... read_67957_1_0_0_0_0_0 OTHER 1 6.67 1 10.00 0 0.00 c 19
.............................................GCAATTTAGTGTGTGTGATAaa.... read_21581_0_1_0_0_0_0 OTHER 1 6.67 1 10.00 0 0.00 aa 20
.............................................GCAATTTAGTGTGTGTGATAT..... read_271782_0_0_0_0_0_1 OTHER 1 6.67 0 0.00 1 20.00 21
...............................................AATTTAGTGTGTGTGATATat... read_32838_0_0_1_0_0_0 OTHER 1 6.67 1 10.00 0 0.00 at 19
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15 10 5
(66.67) (33.33)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 327 197 524 97.22%
OTHER 10 5 15 2.78%
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337 202 539
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