[BEGIN]
REFERENCE HAIRPIN
*************************************************************************************************************
ID : mmu-mir-29c
DESCRIPTION : mmu-mir-29c MI0000577 Mus musculus miR-29c stem-loop
CHROMOSOME : 1
SPAN : 196863741 - 196863828
LENGTH : 88
SEQUENCE : ATCTCTTACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA
OVERHANG THRESHOLD : 75%
*************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-29c
ACCID : MI0000577
PARENT : mmu-mir-29c
CHROMOSOME : 1
START : 196863741
STOP : 196863828
OFFSET : 54..75
SEQUENCE : TAGCACCATTTGAAATCGGTTA
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-29c*
ACCID : MI0000577
PARENT : mmu-mir-29c
CHROMOSOME : 1
START : 196863741
STOP : 196863828
OFFSET : 16..37
SEQUENCE : TGACCGATTTCTCCTGGTGTTC
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________________
ATCTCTTACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA REF 1 196863741 - 196863828
TAGCACCATTTGAAATCGGTTA MATURE 1 196863795 - 196863903 mmu-miR-29c +
TGACCGATTTCTCCTGGTGTTC MATURESTAR 1 196863757 - 196863865 mmu-miR-29c* +
________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......................................................AGCACCATTTGAAATCGGTT............... read_79098_1154_1425_1213_533_714_828 MATURE 5867 40.49 3792 42.35 2075 37.48 20
......................................................AGCACCATTTGAAATCGGTTA.............. read_404409_924_1157_1061_476_650_818 MATURE 5086 35.10 3142 35.09 1944 35.12 21
......................................................AGCACCATTTGAAATCGGT................ read_183207_123_156_117_74_93_118 MATURE 681 4.70 396 4.42 285 5.15 19
......................................................AGCACCATTTGAAATCGGTTAa............. read_370705_116_173_127_66_93_96 MATURE 671 4.63 416 4.65 255 4.61 a 21
......................................................AGCACCATTTGAAATCGGTTAT............. read_78069_35_53_40_34_64_66 MATURE 292 2.02 128 1.43 164 2.96 22
......................................................AGCACCATTTGAAATCGGTTt.............. read_180003_26_37_27_28_54_60 MATURE 232 1.60 90 1.01 142 2.57 t 20
......................................................AGCACCATTTGAAATCG.................. read_190756_3_2_4_23_42_42 MATURE 116 0.80 9 0.10 107 1.93 17
......................................................AGCACCATTTGAAATCGGTTAg............. read_219173_24_26_31_5_12_10 MATURE 108 0.75 81 0.90 27 0.49 g 21
......................................................AGCACCATTTGAAATCGG................. read_313282_7_9_12_19_23_31 MATURE 101 0.70 28 0.31 73 1.32 18
......................................................AGCACCATTTGAAATCGGTa............... read_175611_20_20_22_4_9_10 MATURE 85 0.59 62 0.69 23 0.42 a 19
......................................................AGCACCATTTGAAATCGGTTg.............. read_61331_20_25_15_4_5_11 MATURE 80 0.55 60 0.67 20 0.36 g 20
......................................................AGCACCATTTGAAATCGGTTAaa............ read_133535_9_17_10_5_9_8 MATURE 58 0.40 36 0.40 22 0.40 aa 21
......................................................AGCACCATTTGAAATCGGTaa.............. read_322098_12_7_11_7_4_9 MATURE 50 0.35 30 0.34 20 0.36 aa 19
......................................................AGCACCATTTGAAATCGGTTtt............. read_15833_3_10_10_3_3_9 MATURE 38 0.26 23 0.26 15 0.27 tt 20
......................................................AGCACCATTTGAAATCGtTT............... read_38983_8_13_6_2_4_3 MATURE 36 0.25 27 0.30 9 0.16 17T2
......................................................AGCACCATTTGAAATCGtTTA.............. read_162262_8_5_6_2_2_7 MATURE 30 0.21 19 0.21 11 0.20 17T3
......................................................AGCACCATTTGAAATCtGTTA.............. read_128069_3_7_7_2_3_7 MATURE 29 0.20 17 0.19 12 0.22 16T4
......................................................AGCACCATTTGAAATCtGTT............... read_275365_3_6_7_1_3_5 MATURE 25 0.17 16 0.18 9 0.16 16T3
..........................................................CCATTTGAAATCGGTTA.............. read_302412_1_0_0_8_9_7 MATURE 25 0.17 1 0.01 24 0.43 17
......................................................AGCACCATTTGAAATCGGTgt.............. read_250665_4_7_8_2_1_2 MATURE 24 0.17 19 0.21 5 0.09 gt 19
......................................................AGCACCATTTGAAAgCGGTT............... read_21707_19_0_1_0_1_2 MATURE 23 0.16 20 0.22 3 0.05 14G5
......................................................AGCACCATTTGAAAcCGGTT............... read_13433_17_3_1_0_0_0 MATURE 21 0.14 21 0.23 0 0.00 14C5
......................................................AGCACCATTTGAAAaCGGTT............... read_11518_18_0_2_0_0_1 MATURE 21 0.14 20 0.22 1 0.02 14A5
......................................................AGCACCATTTGAAATCGGTTAat............ read_175776_7_8_2_0_2_1 MATURE 20 0.14 17 0.19 3 0.05 at 21
......................................................AGCACCATTTGAAATCaGTTA.............. read_388873_2_5_2_3_0_7 MATURE 19 0.13 9 0.10 10 0.18 16A4
......................................................AGCACCATTTGAAATCGGTTAc............. read_402974_4_5_3_1_1_4 MATURE 18 0.12 12 0.13 6 0.11 c 21
......................................................cGCACCATTTGAAATCGGTTA.............. read_119875_6_3_2_4_1_1 MATURE 17 0.12 11 0.12 6 0.11 20
......................................................AGCACCATTTGAAAcCGGTTA.............. read_365797_15_0_1_0_1_0 MATURE 17 0.12 16 0.18 1 0.02 14C6
......................................................AGCACCATTTGAAATaGGTT............... read_138360_5_3_2_3_2_1 MATURE 16 0.11 10 0.11 6 0.11 15A4
......................................................AGCACCATTTGAAAaCGGTTA.............. read_392119_15_0_0_0_0_0 MATURE 15 0.10 15 0.17 0 0.00 14A6
.........................................................ACCATTTGAAATCGGTT............... read_363559_1_0_0_3_3_7 MATURE 14 0.10 1 0.01 13 0.23 17
......................................................AGCACCATaTGAAATCGGTT............... read_17494_5_3_2_2_0_2 MATURE 14 0.10 10 0.11 4 0.07 8A11
......................................................AGCACCATTTGAAATtGGTTA.............. read_283777_1_2_3_3_1_3 MATURE 13 0.09 6 0.07 7 0.13 15T5
......................................................AGCACCATTTGAAATCGGa................ read_324445_0_5_1_0_3_3 MATURE 12 0.08 6 0.07 6 0.11 a 18
......................................................AGCACCATTTGAAATCGGTTgt............. read_384569_3_4_2_1_1_1 MATURE 12 0.08 9 0.10 3 0.05 gt 20
......................................................cGCACCATTTGAAATCGGTT............... read_323676_6_3_0_0_1_2 MATURE 12 0.08 9 0.10 3 0.05 19
......................................................AGCACCATTTGAAAgCGGTTA.............. read_337106_12_0_0_0_0_0 MATURE 12 0.08 12 0.13 0 0.00 14G6
......................................................AGCACCATTTGAAATCGGTTta............. read_191460_2_3_2_2_1_1 MATURE 11 0.08 7 0.08 4 0.07 ta 20
......................................................AGCACaATTTGAAATCGGTT............... read_205831_2_5_3_0_1_0 MATURE 11 0.08 10 0.11 1 0.02 5A14
......................................................AGCACCATTTGAAATCGGTga.............. read_292883_3_0_2_2_0_3 MATURE 10 0.07 5 0.06 5 0.09 ga 19
......................................................AGCACCATTTGAAcTCGGTT............... read_403257_2_4_1_0_1_2 MATURE 10 0.07 7 0.08 3 0.05 13C6
......................................................AGCACCATTTGAAATCGGct............... read_334789_2_1_0_3_1_3 MATURE 10 0.07 3 0.03 7 0.13 ct 18
......................................................AGCACCATTTGAAATtGGTT............... read_147017_2_3_1_1_0_3 MATURE 10 0.07 6 0.07 4 0.07 15T4
......................................................AGCACCATTTGAAgTCGGTT............... read_276437_1_3_3_1_1_1 MATURE 10 0.07 7 0.08 3 0.05 13G6
......................................................AGCACCATTTGAAATCGGTc............... read_84036_1_4_0_1_3_1 MATURE 10 0.07 5 0.06 5 0.09 c 19
.....................................................TAGCACCATTTGAAATCGGTT............... read_257191_3_2_0_1_3_1 MATURE 10 0.07 5 0.06 5 0.09 21
......................................................AGCACCATTTGAAcTCGGTTA.............. read_193790_4_0_0_1_1_3 MATURE 9 0.06 4 0.04 5 0.09 13C7
......................................................AGCACCATTTGAAATCGGTaaa............. read_195161_2_3_0_2_1_1 MATURE 9 0.06 5 0.06 4 0.07 aaa 19
......................................................AGCACCATTTGAAATCGtTTAa............. read_173398_0_3_3_1_1_1 MATURE 9 0.06 6 0.07 3 0.05 a 17T3
......................................................AGCACCATTTGAAATCGGTTc.............. read_78477_2_1_5_1_0_0 MATURE 9 0.06 8 0.09 1 0.02 c 20
......................................................AGCACCATTTGAAATCGGTat.............. read_342546_0_1_1_1_0_6 MATURE 9 0.06 2 0.02 7 0.13 at 19
......................................................AGCACCATTTGAAATCGGTTATt............ read_404659_2_2_1_1_1_2 MATURE 9 0.06 5 0.06 4 0.07 t 22
......................................................AGCACCAcTTGAAATCGGTT............... read_30414_0_4_3_0_0_1 MATURE 8 0.06 7 0.08 1 0.02 7C12
......................................................AGCgCCATTTGAAATCGGTT............... read_316077_3_1_0_3_0_1 MATURE 8 0.06 4 0.04 4 0.07 3G16
......................................................AGCACCATTTGAgATCGGTTA.............. read_73437_1_0_3_4_0_0 MATURE 8 0.06 4 0.04 4 0.07 12G8
......................................................AGCACCATTcGAAATCGGTT............... read_352010_2_0_2_0_3_1 MATURE 8 0.06 4 0.04 4 0.07 9C10
......................................................AGCACCATTTGAAATCGGTg............... read_164287_4_1_2_0_1_0 MATURE 8 0.06 7 0.08 1 0.02 g 19
......................................................AGaACCATTTGAAATCGGTTA.............. read_10702_1_2_2_0_2_1 MATURE 8 0.06 5 0.06 3 0.05 2A18
......................................................AGCACCATTTGgAATCGGTT............... read_23165_2_2_1_0_2_0 MATURE 7 0.05 5 0.06 2 0.04 11G8
......................................................AGCACCATgTGAAATCGGTTA.............. read_265520_0_1_2_1_1_2 MATURE 7 0.05 3 0.03 4 0.07 8G12
......................................................AGCgCCATTTGAAATCGGTTA.............. read_70924_1_2_1_0_3_0 MATURE 7 0.05 4 0.04 3 0.05 3G17
......................................................AGCACCATTTGAAATCGGTag.............. read_385298_0_0_3_1_2_1 MATURE 7 0.05 3 0.03 4 0.07 ag 19
......................................................AGCACCATaTGAAATCGGTTA.............. read_276880_0_2_2_0_2_1 MATURE 7 0.05 4 0.04 3 0.05 8A12
......................................................AGCAaCATTTGAAATCGGTT............... read_231443_1_3_3_0_0_0 MATURE 7 0.05 7 0.08 0 0.00 4A15
......................................................AGCACCATTTGAAATCGGTTct............. read_217208_0_1_2_1_1_1 MATURE 6 0.04 3 0.03 3 0.05 ct 20
......................................................AGCACCATTTGAAATCGGTTga............. read_317419_1_1_0_0_3_1 MATURE 6 0.04 2 0.02 4 0.07 ga 20
......................................................AGCACCgTTTGAAATCGGTT............... read_236682_2_3_0_1_0_0 MATURE 6 0.04 5 0.06 1 0.02 6G13
......................................................AGCACtATTTGAAATCGGTT............... read_47088_1_2_3_0_0_0 MATURE 6 0.04 6 0.07 0 0.00 5T14
......................................................AGCACCATTTGAAATCGGcTA.............. read_256180_1_1_1_1_2_0 MATURE 6 0.04 3 0.03 3 0.05 18C2
......................................................AGCACCATTTGAAgTCGGTTA.............. read_351826_1_2_0_0_3_0 MATURE 6 0.04 3 0.03 3 0.05 13G7
......................................................AGCACCATTTGAAATCGGTTAgt............ read_95836_1_1_3_1_0_0 MATURE 6 0.04 5 0.06 1 0.02 gt 21
......................................................AGCACaATTTGAAATCGGTTA.............. read_22288_0_3_1_1_1_0 MATURE 6 0.04 4 0.04 2 0.04 5A15
......................................................AGCACCATTTGAAATaGGTTA.............. read_219508_0_0_1_1_2_2 MATURE 6 0.04 1 0.01 5 0.09 15A5
......................................................AGCACCAcTTGAAATCGGTTA.............. read_272247_0_3_1_1_0_1 MATURE 6 0.04 4 0.04 2 0.04 7C13
.........................................................ACCATTTGAAATCGGTTA.............. read_81244_0_0_0_0_2_3 MATURE 5 0.03 0 0.00 5 0.09 18
......................................................AGCACCATTTGAAATCGGTTtg............. read_156486_1_1_0_0_1_2 MATURE 5 0.03 2 0.02 3 0.05 tg 20
......................................................AGCACCATTTGAAATCGGTTAct............ read_393952_1_1_1_1_0_1 MATURE 5 0.03 3 0.03 2 0.04 ct 21
......................................................AGCACCATTTGAAtTCGGTT............... read_278684_1_1_3_0_0_0 MATURE 5 0.03 5 0.06 0 0.00 13T6
......................................................AGCACCATTTGAAATCGGTTAag............ read_142114_0_1_2_0_2_0 MATURE 5 0.03 3 0.03 2 0.04 ag 21
......................................................AGaACCATTTGAAATCGGTT............... read_373001_0_0_3_1_0_1 MATURE 5 0.03 3 0.03 2 0.04 2A17
......................................................AGCACCATTTGAAATCGGTTAga............ read_304677_0_3_1_1_0_0 MATURE 5 0.03 4 0.04 1 0.02 ga 21
......................................................AGCACCATTTGAAATCGaTTA.............. read_229803_3_1_1_0_0_0 MATURE 5 0.03 5 0.06 0 0.00 17A3
......................................................AGCACCATTTGAAtTCGGTTA.............. read_163383_1_1_2_0_0_1 MATURE 5 0.03 4 0.04 1 0.02 13T7
......................................................AGCACCATTTGAAATCGGaa............... read_366521_1_2_1_1_0_0 MATURE 5 0.03 4 0.04 1 0.02 aa 18
......................................................AGCACCATTTGAAATCGGgt............... read_190951_1_1_1_0_2_0 MATURE 5 0.03 3 0.03 2 0.04 gt 18
......................................................AGCACCATTTaAAATCGGTTA.............. read_245288_2_0_0_0_2_0 MATURE 4 0.03 2 0.02 2 0.04 10A10
......................................................AGCACCATTTGAAAgCGGTTAa............. read_60342_4_0_0_0_0_0 MATURE 4 0.03 4 0.04 0 0.00 a 14G6
......................................................AGCACCATTTGAAATCGGgTA.............. read_182754_1_0_3_0_0_0 MATURE 4 0.03 4 0.04 0 0.00 18G2
.....................................................TAGCACCATTTGAAATCGGT................ read_307458_0_2_0_1_1_0 MATURE 4 0.03 2 0.02 2 0.04 20
......................................................AGCACCATTTGAAATCcGTT............... read_180517_1_1_0_1_0_1 MATURE 4 0.03 2 0.02 2 0.04 16C3
......................................................gGCACCATTTGAAATCGGTT............... read_110355_1_0_1_0_1_1 MATURE 4 0.03 2 0.02 2 0.04 19
......................................................AGCACCATTTaAAATCGGTT............... read_284125_0_0_1_1_1_1 MATURE 4 0.03 1 0.01 3 0.05 10A9
......................................................AGCACCATTTGAAATCaGTTAT............. read_19753_0_1_2_0_1_0 MATURE 4 0.03 3 0.03 1 0.02 16A5
......................................................AGCACCATTcGAAATCGGTTA.............. read_195051_1_1_0_0_0_2 MATURE 4 0.03 2 0.02 2 0.04 9C11
..........................................................CCATTTGAAATCGGTTAT............. read_90066_1_0_0_1_0_1 MATURE 3 0.02 1 0.01 2 0.04 18
......................................................AGCACCATTTGtAATCGGTT............... read_260458_2_0_0_0_1_0 MATURE 3 0.02 2 0.02 1 0.02 11T8
......................................................AGCACCATTTGAAATCGGat............... read_365465_0_1_0_0_0_2 MATURE 3 0.02 1 0.01 2 0.04 at 18
......................................................AGCACCAcTTGAAATCGGTTAa............. read_258625_0_1_1_0_0_1 MATURE 3 0.02 2 0.02 1 0.02 a 7C13
......................................................AGCACCgTTTGAAATCGGTTA.............. read_234267_1_1_0_0_0_1 MATURE 3 0.02 2 0.02 1 0.02 6G14
......................................................AGCACCATcTGAAATCGGTTATG............ read_162607_0_0_1_0_2_0 MATURE 3 0.02 1 0.01 2 0.04 8C14
......................................................AGCcCCATTTGAAATCGGTT............... read_163977_1_0_0_1_1_0 MATURE 3 0.02 1 0.01 2 0.04 3C16
......................................................AGCACCATTTGcAATCGGTT............... read_236687_0_1_0_0_1_1 MATURE 3 0.02 1 0.01 2 0.04 11C8
......................................................AGCAaCATTTGAAATCGGTTA.............. read_189688_0_0_1_1_0_1 MATURE 3 0.02 1 0.01 2 0.04 4A16
......................................................AGCACCATTTGAAAcCGGTTAa............. read_323380_1_0_0_1_0_1 MATURE 3 0.02 1 0.01 2 0.04 a 14C6
......................................................AGCACCATTTGAAATCGGTca.............. read_278855_1_1_1_0_0_0 MATURE 3 0.02 3 0.03 0 0.00 ca 19
......................................................AGCAgCATTTGAAATCGGTT............... read_240375_0_3_0_0_0_0 MATURE 3 0.02 3 0.03 0 0.00 4G15
......................................................AGCAtCATTTGAAATCGGTTA.............. read_209425_0_2_0_1_0_0 MATURE 3 0.02 2 0.02 1 0.02 4T16
......................................................AGCACCATTTGAgATCGGTT............... read_355767_1_0_2_0_0_0 MATURE 3 0.02 3 0.03 0 0.00 12G7
......................................................AGCACCATTTGAAATCGGaaa.............. read_10446_0_1_2_0_0_0 MATURE 3 0.02 3 0.03 0 0.00 aaa 18
......................................................AGCACCtTTTGAAATCGGTTA.............. read_280935_0_0_1_0_1_0 MATURE 2 0.01 1 0.01 1 0.02 6T14
......................................................AGCACCATTTGAAgTCGGTTAT............. read_209935_0_0_0_2_0_0 MATURE 2 0.01 0 0.00 2 0.04 13G8
......................................................AGCACCATTTGAAATtGGTTAa............. read_98815_0_1_0_0_1_0 MATURE 2 0.01 1 0.01 1 0.02 a 15T5
......................................................AGCACCATTTGAgATCGGTTAa............. read_197069_1_0_1_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 a 12G8
......................................................AGCACCATTTGAAATCGGaTA.............. read_258113_1_0_0_0_0_1 MATURE 2 0.01 1 0.01 1 0.02 18A2
......................................................AGCACCATTTGAAATCGcTTA.............. read_81747_1_0_1_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 17C3
......................................................AGCAgCATTTGAAATCGGTTA.............. read_150133_0_0_0_1_1_0 MATURE 2 0.01 0 0.00 2 0.04 4G16
......................................................AGCACCATTTGAAATCGGTac.............. read_406523_0_1_0_0_0_1 MATURE 2 0.01 1 0.01 1 0.02 ac 19
......................................................AGCACCATTTGgAATCGGTTA.............. read_317247_1_1_0_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 11G9
.......................................................GCACCATTTGAAATCGGTT............... read_20614_0_1_1_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 19
......................................................AGCACCAgTTGAAATCGGTTA.............. read_11617_0_1_1_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 7G13
......................................................AGCACCATTTGAAATCGGTTAaaa........... read_385530_0_1_1_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 aaa 21
......................................................AGCACCATTTGAAATCGGTaAT............. read_322247_0_1_1_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 19A2
.....................................................TAGCACCATgTGAAATCGGTT............... read_362295_0_0_0_0_2_0 MATURE 2 0.01 0 0.00 2 0.04 9G11
......................................................AGCACtATTTGAAATCGGTTA.............. read_121869_0_0_1_0_1_0 MATURE 2 0.01 1 0.01 1 0.02 5T15
......................................................AGCACCATaTGAAATCGGTTAa............. read_284656_1_0_1_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 a 8A12
......................................................AGCACCATTTGAAATCGtTTAg............. read_345385_1_1_0_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 g 17T3
......................................................AGCACgATTTGAAATCGGTT............... read_136406_1_0_1_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 5G14
........................................................CACCATTTGAAATCGGTTATt............ read_327963_0_0_0_1_1_0 MATURE 2 0.01 0 0.00 2 0.04 t 20
......................................................AGCAtCATTTGAAATCGGTT............... read_257250_1_1_0_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 4T15
......................................................AGCACCATTTGAAATCGGg................ read_199106_0_1_0_0_1_0 MATURE 2 0.01 1 0.01 1 0.02 g 18
......................................................AGCACCATTTGAAAcCGGTTAg............. read_50978_2_0_0_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 g 14C6
......................................................AGCACCATgTGAAATCGGTT............... read_35389_0_0_2_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 8G11
......................................................AGCACCtTTTGAAATCGGTT............... read_91501_0_1_0_1_0_0 MATURE 2 0.01 1 0.01 1 0.02 6T13
......................................................cGCACCATTTGAAATCGGTTAT............. read_64386_0_0_0_2_0_0 MATURE 2 0.01 0 0.00 2 0.04 21
.........................................................ACCATTTGAAATCGGTTAg............. read_381945_1_0_0_0_1_0 MATURE 2 0.01 1 0.01 1 0.02 g 18
......................................................AGCACCATTTGAAATCGGTTAagt........... read_215746_0_2_0_0_0_0 MATURE 2 0.01 2 0.02 0 0.00 agt 21
......................................................AGCACCATTTGAAATCGtTTAT............. read_56377_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 17T4
......................................................AGCACCATTTGAcATCGGTT............... read_224757_0_0_0_1_0_0 MATURE 1 0.01 0 0.00 1 0.02 12C7
......................................................AGgACCATTTGAAATCGGTTA.............. read_152921_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 2G18
......................................................AGCACCATTTGAAATCGGTTAac............ read_68801_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 ac 21
......................................................AGCACCATTTGAAATCGGTgcg............. read_334984_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 gcg 19
......................................................gGCACCATTTGAAATCGGTTc.............. read_133325_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 c 19
......................................................AGCtCCATTTGAAATCGGTTAg............. read_254661_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 g 3T17
......................................................AGCACCcTTTGAAATCGGTTA.............. read_318407_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 6C14
......................................................AGCACCATTTGAAATCGGTgta............. read_305086_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 gta 19
......................................................AGCACCATTTGAAATCGGTTtat............ read_130500_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 tat 20
......................................................gGCACCATTTGAAATCGGTTA.............. read_375768_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 20
......................................................AGCACCATTTGAAATCGGTTATc............ read_142757_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 c 22
.....................................................TAGCACCATTTGAAATCGGTgt.............. read_348390_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 gt 20
......................................................AGCACCATTTGAAATCGaTTAg............. read_24923_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 g 17A3
.......................................................aCACCATTTGAAATCGGTT............... read_141165_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 18
......................................................AGCACCATTTGAAATCGGga............... read_283389_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 ga 18
......................................................AGCACCATTTGAAtTCGGTTAg............. read_164765_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 g 13T7
......................................................AGCACCATTTGAAATCGGgtt.............. read_198865_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 gtt 18
......................................................AGCACCATTTGAAATCGGagt.............. read_125746_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 agt 18
......................................................AGCcCCATTTGAAATCGGTTA.............. read_179473_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 3C17
......................................................AGCACCAaTTGAAATCGGTTAa............. read_101301_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 a 7A13
......................................................AGCACCATTTGAAATCtGTTAg............. read_316817_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 g 16T4
......................................................AGCACCATTTGcAATCGGTTAa............. read_25186_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 a 11C9
......................................................AGCACCATTTGAAATCGGTcag............. read_37523_0_0_0_1_0_0 MATURE 1 0.01 0 0.00 1 0.02 cag 19
......................................................AGCACCAgTTGAAATCGGTTAaa............ read_54033_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 aa 7G13
......................................................AGCACCATTTGAAATaGGTTAa............. read_241637_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 a 15A5
......................................................AGCACCATTTGAAATCGGaag.............. read_188614_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 aag 18
......................................................AGCACCATTTGAAATCGGTTAgc............ read_351632_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 gc 21
......................................................AGCACCATTTGAAATCGGTTAaat........... read_139841_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 aat 21
......................................................AGCACCATTTGAAATCGGTTttt............ read_334265_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 ttt 20
......................................................AGCACCATTTGAAATCGGTgaa............. read_21848_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 gaa 19
......................................................AGCACCATTTGAtATCGGTTAa............. read_22277_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 a 12T8
......................................................AGCAtCATTTGAAATCGGTTAa............. read_273012_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 a 4T16
......................................................cGCACCATTTGAAATCGGT................ read_397955_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 18
......................................................AGCACCATTTGAAcTCGGTTAa............. read_87628_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 a 13C7
........................................................CACCATTTGAAATCGGTT............... read_391471_0_0_0_1_0_0 MATURE 1 0.01 0 0.00 1 0.02 18
......................................................AGCAgCATTTGAAATCGGTTAT............. read_159675_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 4G17
......................................................AGCACCATTTGAAAaCGGTTAg............. read_90928_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 g 14A6
......................................................AGCACCATTTGAAATgGGTTA.............. read_210301_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 15G5
......................................................AGCACCATTTGAAATCGGTgc.............. read_97382_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 gc 19
......................................................AGCACCATTTGAAATCGtTTAaa............ read_87730_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 aa 17T3
......................................................AGCACCATTTGAAATCGGTTgtt............ read_152188_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 gtt 20
......................................................AGCACCAgTTGAAATCGGTT............... read_164779_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 7G12
......................................................AGCACCATTTGAAtTCGGTTAaa............ read_76861_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 aa 13T7
.....................................................TAGCACCATTTGAAATCGtgt............... read_333013_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 tgt 18
......................................................AGCACCATTTGAtATCGGTT............... read_341382_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 12T7
......................................................AGCACCATTTGAAATCGGTgAT............. read_255257_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 19G2
.....................................................TAGCACCATTTGAAATCGtTT............... read_97992_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 18T2
......................................................AGCACCgTTTGAAATCGGTTAaa............ read_192123_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 aa 6G14
......................................................AGCACCATTaGAAATCGGTT............... read_372366_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 9A10
......................................................AGCACCATTTGAAATCGGcg............... read_123982_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 cg 18
......................................................AGCACCATTTGAgATCGGTTAT............. read_24152_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 12G9
......................................................AGaACCATTTGAAATCGGTTAT............. read_44465_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 2A19
......................................................AGCACCATTTGAtATCGGTTA.............. read_214956_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 12T8
......................................................AGCACCATTTGAAATCGGaTAg............. read_205578_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 g 18A2
......................................................AGCACCATTTGAAATCtGTTAc............. read_40898_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 c 16T4
......................................................AGCACCATTTGAAATCGGTct.............. read_145333_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 ct 19
.......................................................GCACCATTTGAAATCGGTTA.............. read_310903_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 20
......................................................AGCACCATTTGAAATCGGcTAa............. read_347693_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 a 18C2
......................................................AGCACCATTTGAAATaGGTTAT............. read_404572_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 15A6
......................................................AGCACCtTTTGAAATCGGTTAa............. read_215550_0_0_0_1_0_0 MATURE 1 0.01 0 0.00 1 0.02 a 6T14
......................................................AGCACCATTTGAAATCGGTata............. read_96007_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 ata 19
......................................................AGCAaCATTTGAAATCGGTTAa............. read_255908_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 a 4A16
......................................................AGCgCCATTTGAAATCGGTTAa............. read_45788_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 a 3G17
.......................................................cCACCATTTGAAATCGGTT............... read_73739_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 18
.........................................................ACCATTTGAAATCGGTTAa............. read_245950_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 a 18
......................................................AGCACtATTTGAAATCGGTTAa............. read_146773_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 a 5T15
......................................................AGtACCATTTGAAATCGGTT............... read_388425_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 2T17
......................................................AGCACCATTTGcAATCGGTTA.............. read_363844_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 11C9
......................................................AGCACCcTTTGAAATCGGTT............... read_312766_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 6C13
......................................................AGCACCATTTGAAATCGGTTATa............ read_296182_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 a 22
......................................................AGCACCATTTGAAATCGGc................ read_3950_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 c 18
......................................................AGCACCATTTGAAATCGGTTAcc............ read_244612_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 cc 21
....................................................CTAGCACCATTTGAAATCGGTTA.............. read_96361_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 23
......................................................AGCACCATTTGAAATCGGTTttac........... read_48568_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 ttac 20
......................................................AGCACCATTTGAAcTCGGTTAT............. read_221788_0_0_0_1_0_0 MATURE 1 0.01 0 0.00 1 0.02 13C8
......................................................AGCACCATTTGAAATCcGTTAc............. read_102638_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 c 16C4
......................................................cGCACCATTTGAAATCGGTTt.............. read_326769_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 t 19
......................................................AGCACCATTTGAAATCGGTTca............. read_365988_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 ca 20
......................................................gGCACCATTTGAAATCGGT................ read_85803_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 18
......................................................AGCACCATTTcAAATCGGTT............... read_123774_0_0_0_1_0_0 MATURE 1 0.01 0 0.00 1 0.02 10C9
......................................................AGCACCATTTGAAATCGGTTATG............ read_332645_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 23
......................................................AGCgCCATTTGAAATCGGTTAT............. read_290357_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 3G18
......................................................AGCACCATTTGAAATCGGTTAaag........... read_67309_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 aag 21
......................................................AGCACCATTTGAcATCGGTTA.............. read_191610_0_0_0_1_0_0 MATURE 1 0.01 0 0.00 1 0.02 12C8
......................................................AGCACCATTTGAAgTCGGTTAaa............ read_200966_0_0_0_0_0_1 MATURE 1 0.01 0 0.00 1 0.02 aa 13G7
......................................................AGCACCATTTGAAATCGGTTATct........... read_233284_1_0_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 ct 22
......................................................AGCACCATTTGAAcTCGGTTAct............ read_15337_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 ct 13C7
...........................................................CATTTGAAATCGGTTAT............. read_314348_0_0_0_1_0_0 MATURE 1 0.01 0 0.00 1 0.02 17
......................................................AGCACCATTTGAtATCGGTTAT............. read_79768_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 12T9
......................................................AGCACCATTTGAAATtGGTTAT............. read_389167_0_0_1_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 15T6
.....................................................TAGCACCATTTGAAATCcGT................ read_325535_0_0_0_0_1_0 MATURE 1 0.01 0 0.00 1 0.02 17C2
......................................................AGCACCATTTGAAATCcGTTA.............. read_353188_0_1_0_0_0_0 MATURE 1 0.01 1 0.01 0 0.00 16C4
---------- ---------- ----------
14489 8953 5536
(61.79) (38.21)
*** MATURESTAR ***
________________________________________________________________________________________
ATCTCTTACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA REF 1 196863741 - 196863828
TAGCACCATTTGAAATCGGTTA MATURE 1 196863795 - 196863903 mmu-miR-29c +
TGACCGATTTCTCCTGGTGTTC MATURESTAR 1 196863757 - 196863865 mmu-miR-29c* +
________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................GACCGATTTCTCCTGGTGTT..................................................... read_12606_1_10_9_6_4_9 MATURESTAR 39 21.43 20 18.52 19 25.68 20
................GACCGATTTCTCCTGGTGTTC.................................................... read_52485_3_6_3_1_4_3 MATURESTAR 20 10.99 12 11.11 8 10.81 21
..................CCGATTTCTCCTGGTGTTCAGA................................................. read_323943_3_3_3_2_3_1 MATURESTAR 15 8.24 9 8.33 6 8.11 22
................GACCGATTTCTCCTGGTGTTa.................................................... read_302346_4_4_2_0_1_0 MATURESTAR 11 6.04 10 9.26 1 1.35 a 20
................GACCGATTTCTCCTGGTGT...................................................... read_367693_2_5_1_1_1_1 MATURESTAR 11 6.04 8 7.41 3 4.05 19
................GACCGATTTCTCCTGGTGTTt.................................................... read_228506_0_3_1_1_3_2 MATURESTAR 10 5.49 4 3.70 6 8.11 t 20
.................ACCGATTTCTCCTGGTGTT..................................................... read_152496_0_3_1_1_1_3 MATURESTAR 9 4.95 4 3.70 5 6.76 19
.................ACCGATTTCTCCTGGTGTTCA................................................... read_324119_2_1_3_0_0_2 MATURESTAR 8 4.40 6 5.56 2 2.70 21
................GACCGATTTCTCCTGGTGTTCt................................................... read_405578_2_0_1_1_1_1 MATURESTAR 6 3.30 3 2.78 3 4.05 t 21
..................CCGATTTCTCCTGGTGTTCAGt................................................. read_91928_2_3_0_0_0_0 MATURESTAR 5 2.75 5 4.63 0 0.00 t 21
................GACCGATTTCTCCTGGTGTTCA................................................... read_275952_2_1_2_0_0_0 MATURESTAR 5 2.75 5 4.63 0 0.00 22
.................ACCGATTTCTCCTGGTGTTC.................................................... read_380351_0_2_1_0_1_0 MATURESTAR 4 2.20 3 2.78 1 1.35 20
.................ACCGATTTCTCCTGGTGTTa.................................................... read_319963_3_0_0_0_0_0 MATURESTAR 3 1.65 3 2.78 0 0.00 a 19
..................CCGATTTCTCCTGGTGTTCA................................................... read_106614_1_1_0_1_0_0 MATURESTAR 3 1.65 2 1.85 1 1.35 20
.................ACCGATTTCTCCTGGTGT...................................................... read_10938_0_0_0_1_0_2 MATURESTAR 3 1.65 0 0.00 3 4.05 18
................GACCGATTTCTCCTGGTGTTaa................................................... read_400266_1_1_0_0_0_0 MATURESTAR 2 1.10 2 1.85 0 0.00 aa 20
..................CCGATTTCTCCTGGTGTTC.................................................... read_3988_0_0_0_0_1_1 MATURESTAR 2 1.10 0 0.00 2 2.70 19
..................CCGATTTCTCCTGGTGTTCAta................................................. read_247364_0_0_0_0_2_0 MATURESTAR 2 1.10 0 0.00 2 2.70 ta 20
..................CCGATTTCTCCTGGTGTT..................................................... read_401038_1_0_0_1_0_0 MATURESTAR 2 1.10 1 0.93 1 1.35 18
................GACCGATTTCTCCTGGTGTTag................................................... read_96472_0_2_0_0_0_0 MATURESTAR 2 1.10 2 1.85 0 0.00 ag 20
................GACCGATTTCTCCTGtTGTTC.................................................... read_15900_0_0_0_1_1_0 MATURESTAR 2 1.10 0 0.00 2 2.70 15T5
.................ACCGATTTCTCCTGGTGTTg.................................................... read_50554_0_0_0_0_1_1 MATURESTAR 2 1.10 0 0.00 2 2.70 g 19
..................CCGATTTCTCCTGGTGTTCAG.................................................. read_396781_1_0_0_1_0_0 MATURESTAR 2 1.10 1 0.93 1 1.35 21
..................CCGATTTCTCCTGGTcTTCA................................................... read_232237_0_1_0_0_0_0 MATURESTAR 1 0.55 1 0.93 0 0.00 15C4
..................CCGATTTCTCCTGGTGTTCt................................................... read_15696_0_0_0_0_1_0 MATURESTAR 1 0.55 0 0.00 1 1.35 t 19
.....................ATTTCTCCTGGTGTTCAGA................................................. read_201996_0_0_0_0_1_0 MATURESTAR 1 0.55 0 0.00 1 1.35 19
..................CCGATTTCTCCTGGTtTTCAGc................................................. read_100603_0_0_1_0_0_0 MATURESTAR 1 0.55 1 0.93 0 0.00 c 15T5
................GACCGATTTCTCCTaGTGTT..................................................... read_374788_1_0_0_0_0_0 MATURESTAR 1 0.55 1 0.93 0 0.00 14A5
.................ACCGATTTCTCCTGGTGTTta................................................... read_240095_1_0_0_0_0_0 MATURESTAR 1 0.55 1 0.93 0 0.00 ta 19
................GACCGATTTCTCCTGGTGTTCAt.................................................. read_43882_0_0_0_0_1_0 MATURESTAR 1 0.55 0 0.00 1 1.35 t 22
................GACCGATTTCTCCTGGTGc...................................................... read_194284_0_0_1_0_0_0 MATURESTAR 1 0.55 1 0.93 0 0.00 c 18
..................CCGATTTCTCCTGGTGTTCcg.................................................. read_364228_0_0_0_0_0_1 MATURESTAR 1 0.55 0 0.00 1 1.35 cg 19
................GACCGATTTCTCCTGGTGctt.................................................... read_111571_0_0_0_1_0_0 MATURESTAR 1 0.55 0 0.00 1 1.35 ctt 18
................GACCGATTTCTCCTGGTGTTCAG.................................................. read_265324_0_0_1_0_0_0 MATURESTAR 1 0.55 1 0.93 0 0.00 23
................GACCGATTTCTCCTGGTGTTagt.................................................. read_105190_1_0_0_0_0_0 MATURESTAR 1 0.55 1 0.93 0 0.00 agt 20
.................ACCGATTTCTCCTGGTGTTt.................................................... read_214471_0_0_0_0_0_1 MATURESTAR 1 0.55 0 0.00 1 1.35 t 19
................GACCGATTTCTCCTGGTGct..................................................... read_80134_0_0_1_0_0_0 MATURESTAR 1 0.55 1 0.93 0 0.00 ct 18
---------- ---------- ----------
182 108 74
(59.34) (40.66)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 8953 5536 14489 98.76%
MATURESTAR 108 74 182 1.24%
---------- ---------- ----------
9061 5610 14671
[END]