[BEGIN]
REFERENCE HAIRPIN
************************************************************************************
ID : mmu-mir-299
DESCRIPTION : mmu-mir-299 MI0000399 Mus musculus miR-299 stem-loop
CHROMOSOME : 12
SPAN : 110948848 - 110948910
LENGTH : 63
SEQUENCE : AAGAAATGGTTTACCGTCCCACATACATTTTGAGTATGTATGTGGGACGGTAAACCGCTTCTT
OVERHANG THRESHOLD : 75%
************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-299
ACCID : MI0000399
PARENT : mmu-mir-299
CHROMOSOME : 12
START : 110948848
STOP : 110948910
OFFSET : 39..60
SEQUENCE : TATGTGGGACGGTAAACCGCTT
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-299*
ACCID : MI0000399
PARENT : mmu-mir-299
CHROMOSOME : 12
START : 110948848
STOP : 110948910
OFFSET : 7..28
SEQUENCE : TGGTTTACCGTCCCACATACAT
STRAND : +
******************************
*** MATURE ***
_______________________________________________________________
AAGAAATGGTTTACCGTCCCACATACATTTTGAGTATGTATGTGGGACGGTAAACCGCTTCTT REF 12 110948848 - 110948910
TATGTGGGACGGTAAACCGCTT MATURE 12 110948887 - 110948970 mmu-miR-299 +
TGGTTTACCGTCCCACATACAT MATURESTAR 12 110948855 - 110948938 mmu-miR-299* +
_______________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................................ATGTGGGACGGTAAACCGCT..... read_99906_0_1_0_0_0_0 MATURE 1 100.00 1 100.00 0 0 20
---------- ---------- ----------
1 1 0
(100.00) (0.00)
*** MATURESTAR ***
_______________________________________________________________
AAGAAATGGTTTACCGTCCCACATACATTTTGAGTATGTATGTGGGACGGTAAACCGCTTCTT REF 12 110948848 - 110948910
TATGTGGGACGGTAAACCGCTT MATURE 12 110948887 - 110948970 mmu-miR-299 +
TGGTTTACCGTCCCACATACAT MATURESTAR 12 110948855 - 110948938 mmu-miR-299* +
_______________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......GGTTTACCGTCCCACATAC...................................... read_28486_0_0_0_0_0_1 MATURESTAR 1 100.00 0 0 1 100.00 19
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1 0 1 50.00%
MATURESTAR 0 1 1 50.00%
---------- ---------- ----------
1 1 2
[END]