[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************
ID : mmu-mir-298
DESCRIPTION : mmu-mir-298 MI0000398 Mus musculus miR-298 stem-loop
CHROMOSOME : 2
SPAN : 174093005 - 174093086
LENGTH : 82
SEQUENCE : CCAGGCCTTTGGCAGAGGAGGGCTGTTCTTCCCTTGAGTTTTATGACTGGGAGGAACTAGCCTTCTCTCAGCTTAGGAGTGG
OVERHANG THRESHOLD : 75%
*******************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-298
ACCID : MI0000398
PARENT : mmu-mir-298
CHROMOSOME : 2
START : 174093005
STOP : 174093086
OFFSET : 11..33
SEQUENCE : GGCAGAGGAGGGCTGTTCTTCCC
STRAND : -
******************************
*** MATURE ***
__________________________________________________________________________________
CCAGGCCTTTGGCAGAGGAGGGCTGTTCTTCCCTTGAGTTTTATGACTGGGAGGAACTAGCCTTCTCTCAGCTTAGGAGTGG REF 2 174093005 - 174093086
GGCAGAGGAGGGCTGTTCTTCCC MATURE 2 174093016 - 174093119 mmu-miR-298 -
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........GCAGAGGAGGGCTGTTCTT..................................................... read_377332_3_2_2_1_1_1 MATURE 10 20.00 7 25.93 3 13.04 19
...........GCAGAGGAGGGCTGTTCTTCC................................................... read_12801_1_1_1_1_2_2 MATURE 8 16.00 3 11.11 5 21.74 21
...........GCAGAGGAGGGCTGTTCTTC.................................................... read_208850_1_2_0_1_2_0 MATURE 6 12.00 3 11.11 3 13.04 20
...........GCAGAGGAGGGCTGTTCTTCCC.................................................. read_272362_0_1_0_1_2_1 MATURE 5 10.00 1 3.70 4 17.39 22
...........GCAGAGGAGGGCTGTTCTTt.................................................... read_306737_0_1_1_0_0_1 MATURE 3 6.00 2 7.41 1 4.35 t 19
.............AGAGGAGGGCTGTTaTTCCCT................................................. read_36941_0_0_0_0_0_1 MATURE 1 2.00 0 0.00 1 4.35 14A6
...........GCAGAGGAGGGCTGTTCTTaaat................................................. read_367007_0_1_0_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 aaat 19
...........GCAGAGGAGGGCTGTTCTTCCCc................................................. read_55736_0_0_0_1_0_0 MATURE 1 2.00 0 0.00 1 4.35 c 22
...........GCAGAGGAGGGCTGTTCT...................................................... read_43357_0_1_0_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 18
...........GCAGAGGAGGGCTGTTCTTCCat................................................. read_11666_1_0_0_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 at 21
...........GCAGAGGAGGGCTGTTCTTtt................................................... read_53429_1_0_0_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 tt 19
...........GCAGAGGAGGGCTGTTCTTtta.................................................. read_410772_0_1_0_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 tta 19
...........GCAGAGGAGGGCTGTTCTTCatt................................................. read_187355_1_0_0_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 att 20
...........GCAGAGGAGGGCTGTTCTca.................................................... read_372847_0_1_0_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 ca 18
...........GCAGAGGAGGGCTGTTCTTCa................................................... read_303677_1_0_0_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 a 20
...........GCAGAGGAGGGCTGTTCTTCCCat................................................ read_150828_0_0_1_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 at 22
...........GCAGAGGAGGGCcGTTCTTCC................................................... read_181955_0_0_0_1_0_0 MATURE 1 2.00 0 0.00 1 4.35 12C8
...........GCAGAGGAGGGCTGTTCTTCCCaa................................................ read_378840_0_0_0_0_0_1 MATURE 1 2.00 0 0.00 1 4.35 aa 22
...........GCAGAGGAGGGCTGTTCTTCCCT................................................. read_275439_0_0_0_0_0_1 MATURE 1 2.00 0 0.00 1 4.35 23
...........GCAGAGGAGGGCTGTTCTTa.................................................... read_40158_0_0_0_0_0_1 MATURE 1 2.00 0 0.00 1 4.35 a 19
...........GCAGAGGAGGGCTGTTCTTCCaa................................................. read_316878_0_0_1_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 aa 21
...........GCAGAGGAGGGCTGTTCTTat................................................... read_134014_0_1_0_0_0_0 MATURE 1 2.00 1 3.70 0 0.00 at 19
...........GCAGAGGAGGGCTGTTC....................................................... read_14270_0_0_0_0_1_0 MATURE 1 2.00 0 0.00 1 4.35 17
---------- ---------- ----------
50 27 23
(54.00) (46.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 27 23 50 100.00%
---------- ---------- ----------
27 23 50
[END]