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REFERENCE HAIRPIN
***********************************************************************************************************************
ID                 : mmu-mir-297a-4
DESCRIPTION        : mmu-mir-297a-4 MI0005489 Mus musculus miR-297a-4 stem-loop
CHROMOSOME         : 2
SPAN               : 10438694 - 10438791
LENGTH             : 98
SEQUENCE           : CTGTGTGTATATGTATGTGTGCATGTGCATGTGTGTATATGAGTATACATATACATACACACATACCCATACAAGCATGCACACAAATACACGCAAAA
OVERHANG THRESHOLD : 75%
***********************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-297a
ACCID      : MI0005489
PARENT     : mmu-mir-297a-4
CHROMOSOME : 2
START      : 10438694
STOP       : 10438791
OFFSET     : 11..32
SEQUENCE   : ATGTATGTGTGCATGTGCATGT
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-297a*
ACCID      : MI0005489
PARENT     : mmu-mir-297a-4
CHROMOSOME : 2
START      : 10438694
STOP       : 10438791
OFFSET     : 50..71
SEQUENCE   : TATACATACACACATACCCATA
STRAND     : +
******************************



*** MATURE ***
__________________________________________________________________________________________________
CTGTGTGTATATGTATGTGTGCATGTGCATGTGTGTATATGAGTATACATATACATACACACATACCCATACAAGCATGCACACAAATACACGCAAAA REF                  2                    10438694 - 10438791  
          ATGTATGTGTGCATGTGCATGT                                                                   MATURE               2                    10438705 - 10438823  mmu-miR-297a         +                    
                                                 TATACATACACACATACCCATA                            MATURESTAR           2                    10438744 - 10438862  mmu-miR-297a*        +                    
__________________________________________________________________________________________________

                                                                                              -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
................GTGTGCATGTGCATGTGTGT...............................................................   read_209036_1_1_0_1_0_0       MATURE            3        60.00            2        50.00            1       100.00                        20   
..........ATGTATGTGTGCATGTGCATG....................................................................   read_145166_1_0_0_0_0_0       MATURE            1        20.00            1        25.00            0         0.00                        21   
................GTGTGCATGTGCATGTGTGTAT.............................................................   read_378002_1_0_0_0_0_0       MATURE            1        20.00            1        25.00            0         0.00                        22   
                                                                                                                                             ----------                ----------                ----------   
                                                                                                                                                      5                         4                         1                                          
                                                                                                                                                                          (80.00)                   (20.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               4               1               5         100.00%
                     ----------      ----------      ----------                
                              4               1               5                



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