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REFERENCE HAIRPIN
***************************************************************************************************************************
ID                 : mmu-mir-297a-3
DESCRIPTION        : mmu-mir-297a-3 MI0005488 Mus musculus miR-297a-3 stem-loop
CHROMOSOME         : 2
SPAN               : 10437447 - 10437548
LENGTH             : 102
SEQUENCE           : CTGTGTGTATATGTATGTGTGCATGTGCATGTGTGTATATGAATATACATATACATACACACATACCCATACAAACATGCACACAAACACACAGAAAATTGA
OVERHANG THRESHOLD : 75%
***************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-297a
ACCID      : MI0005488
PARENT     : mmu-mir-297a-3
CHROMOSOME : 2
START      : 10437447
STOP       : 10437548
OFFSET     : 11..32
SEQUENCE   : ATGTATGTGTGCATGTGCATGT
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-297a*
ACCID      : MI0005488
PARENT     : mmu-mir-297a-3
CHROMOSOME : 2
START      : 10437447
STOP       : 10437548
OFFSET     : 50..71
SEQUENCE   : TATACATACACACATACCCATA
STRAND     : +
******************************



*** MATURE ***
______________________________________________________________________________________________________
CTGTGTGTATATGTATGTGTGCATGTGCATGTGTGTATATGAATATACATATACATACACACATACCCATACAAACATGCACACAAACACACAGAAAATTGA REF                  2                    10437447 - 10437548  
          ATGTATGTGTGCATGTGCATGT                                                                       MATURE               2                    10437458 - 10437580  mmu-miR-297a         +                    
                                                 TATACATACACACATACCCATA                                MATURESTAR           2                    10437497 - 10437619  mmu-miR-297a*        +                    
______________________________________________________________________________________________________

                                                                                                  -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
................GTGTGCATGTGCATGTGTGT...................................................................   read_209036_1_1_0_1_0_0       MATURE            3        60.00            2        50.00            1       100.00                        20   
..........ATGTATGTGTGCATGTGCATG........................................................................   read_145166_1_0_0_0_0_0       MATURE            1        20.00            1        25.00            0         0.00                        21   
................GTGTGCATGTGCATGTGTGTAT.................................................................   read_378002_1_0_0_0_0_0       MATURE            1        20.00            1        25.00            0         0.00                        22   
                                                                                                                                                 ----------                ----------                ----------   
                                                                                                                                                          5                         4                         1                                          
                                                                                                                                                                              (80.00)                   (20.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               4               1               5         100.00%
                     ----------      ----------      ----------                
                              4               1               5                



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