[BEGIN]

REFERENCE HAIRPIN
***********************************************************************************************
ID                 : mmu-mir-23b
DESCRIPTION        : mmu-mir-23b MI0000141 Mus musculus miR-23b stem-loop
CHROMOSOME         : 13
SPAN               : 63401792 - 63401865
LENGTH             : 74
SEQUENCE           : GGCTGCTTGGGTTCCTGGCATGCTGATTTGTGACTTGAGATTAAAATCACATTGCCAGGGATTACCACGCAACC
OVERHANG THRESHOLD : 75%
***********************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-23b
ACCID      : MI0000141
PARENT     : mmu-mir-23b
CHROMOSOME : 13
START      : 63401792
STOP       : 63401865
OFFSET     : 46..66
SEQUENCE   : ATCACATTGCCAGGGATTACC
STRAND     : +
******************************



*** MATURE ***
__________________________________________________________________________
GGCTGCTTGGGTTCCTGGCATGCTGATTTGTGACTTGAGATTAAAATCACATTGCCAGGGATTACCACGCAACC REF                  13                   63401792 - 63401865  
                                             ATCACATTGCCAGGGATTACC         MATURE               13                   63401838 - 63401931  mmu-miR-23b          +                    
__________________________________________________________________________

                                                                      -SEQ-                      -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...............................................CACATTGCCAGGGATTACCACt......   read_167269_17_18_8_4_5_9       MATURE           61        40.67           43        40.95           18        40.00            t           21   
...............................................CACATTGCCAGGGATTACCA........     read_393299_2_4_2_0_2_0       MATURE           10         6.67            8         7.62            2         4.44                        20   
...............................................CACATTGCCAGGGATTACCAt.......     read_168445_1_0_4_0_1_1       MATURE            7         4.67            5         4.76            2         4.44            t           20   
...............................................CACATTGCCAGGGATTACCACtt.....       read_5338_0_2_1_1_1_2       MATURE            7         4.67            3         2.86            4         8.89           tt           21   
...............................................CACATTGCCAGGGATTAC..........     read_359428_4_1_1_1_0_0       MATURE            7         4.67            6         5.71            1         2.22                        18   
...............................................CACATTGCCAGGGATTACC.........     read_100993_2_0_2_1_0_0       MATURE            5         3.33            4         3.81            1         2.22                        19   
...............................................CACATTGCCAGGGATTACa.........     read_345622_0_2_1_0_0_2       MATURE            5         3.33            3         2.86            2         4.44            a           18   
...............................................CACATTGCCAGGGATTACCAC.......     read_187918_0_3_0_0_0_1       MATURE            4         2.67            3         2.86            1         2.22                        21   
...............................................CACATTGCCAGGGATTACCACtg.....     read_295275_1_1_1_0_0_0       MATURE            3         2.00            3         2.86            0         0.00           tg           21   
.............................................ATCACATTGCCAGGGATT............     read_140620_1_0_0_0_2_0       MATURE            3         2.00            1         0.95            2         4.44                        18   
.............................................ATCACATTGCCAGGGATTACC.........      read_44352_1_0_1_0_0_0       MATURE            2         1.33            2         1.90            0         0.00                        21   
...............................................CACATTGCCAGGGATTACCACttt....     read_330111_2_0_0_0_0_0       MATURE            2         1.33            2         1.90            0         0.00          ttt           21   
...............................................CACATTGCCAGGGATTACCACa......      read_84724_0_2_0_0_0_0       MATURE            2         1.33            2         1.90            0         0.00            a           21   
.............................................ATCACATTGCCAGGGATTttaa........     read_325290_0_1_1_0_0_0       MATURE            2         1.33            2         1.90            0         0.00         ttaa           18   
...............................................CACATTGCCAGGGATTACt.........      read_52928_0_1_1_0_0_0       MATURE            2         1.33            2         1.90            0         0.00            t           18   
...............................................CACATTGCCAGGGATTA...........     read_367483_0_0_0_0_2_0       MATURE            2         1.33            0         0.00            2         4.44                        17   
.................................................CATTGCCAGGGATTACCA........      read_19079_0_1_1_0_0_0       MATURE            2         1.33            2         1.90            0         0.00                        18   
...............................................CACATTGCCAGGGATTACCAtt......     read_129341_0_1_0_0_0_1       MATURE            2         1.33            1         0.95            1         2.22           tt           20   
.............................................ATCACATTGCCAGGGATTcCCA........     read_389245_0_1_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00                      18C3   
...............................................CACATTGCCAGGGAcTACCACt......     read_242427_0_1_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00            t         14C6   
.............................................ATCACATTGCCAGGGATTAt..........     read_228850_1_0_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00            t           19   
...............................................CACATTGCCAGGGATTACCACta.....     read_311868_0_1_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00           ta           21   
..............................................TCACATTGCCAGGGATTACCA........     read_222384_0_1_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00                        21   
.............................................ATCACATTGCCAGGGATTtag.........     read_371159_0_0_0_0_1_0       MATURE            1         0.67            0         0.00            1         2.22          tag           18   
..................................................ATTGCCAGGGATTACCACt......     read_261650_0_0_0_0_0_1       MATURE            1         0.67            0         0.00            1         2.22            t           18   
..............................................TCACATTGCCAGGGATTACCAC.......     read_383724_0_0_1_0_0_0       MATURE            1         0.67            1         0.95            0         0.00                        22   
..............................................cCACATTGCCAGGGATTAC..........      read_94770_0_1_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00                        18   
...............................................CACATTGCCAGGGATTACCAta......     read_249997_1_0_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00           ta           20   
...............................................CACATTGCCAGGGATTACCgct......      read_55733_0_0_0_1_0_0       MATURE            1         0.67            0         0.00            1         2.22          gct           19   
...............................................CACATTGCCAGGGATTACCAa.......     read_205922_1_0_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00            a           20   
...............................................CACATTGtCAGGGATTACCACt......      read_74526_1_0_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00            t         7T13   
.................................................CATTGCCAGGGATTACCACt......     read_140561_0_0_0_0_0_1       MATURE            1         0.67            0         0.00            1         2.22            t           19   
.............................................ATCACATTGCCAGGGAT.............       read_7209_0_0_0_1_0_0       MATURE            1         0.67            0         0.00            1         2.22                        17   
...............................................CACATTGCCAGGGcTTACCACta.....     read_273160_0_0_0_1_0_0       MATURE            1         0.67            0         0.00            1         2.22           ta         13C7   
.............................................ATCACATTGCCAGGGATTAaaaa.......     read_101847_0_0_0_1_0_0       MATURE            1         0.67            0         0.00            1         2.22         aaaa           19   
................................................ACATTGCCAGGGATTACCACt......     read_293109_0_0_0_0_0_1       MATURE            1         0.67            0         0.00            1         2.22            t           20   
.............................................ATCACATTGCCAGGGATTAC..........     read_391148_1_0_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00                        20   
.............................................ATCACATTGCCAGGGATTtaa.........      read_22593_0_0_0_1_0_0       MATURE            1         0.67            0         0.00            1         2.22          taa           18   
...............................................CACATTGCCAGGGATTACCtt.......     read_119151_0_1_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00           tt           19   
...............................................CACATTGCCAGGGgTTACCACt......      read_82462_1_0_0_0_0_0       MATURE            1         0.67            1         0.95            0         0.00            t         13G7   
                                                                                                                       ----------                ----------                ----------   
                                                                                                                              150                       105                        45                                          
                                                                                                                                                    (70.00)                   (30.00)                                       




*** OTHER ***
__________________________________________________________________________
GGCTGCTTGGGTTCCTGGCATGCTGATTTGTGACTTGAGATTAAAATCACATTGCCAGGGATTACCACGCAACC REF                  13                   63401792 - 63401865  
                                             ATCACATTGCCAGGGATTACC         MATURE               13                   63401838 - 63401931  mmu-miR-23b          +                    
__________________________________________________________________________

                                                                      -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
........GGGTTCCTGGCATGCTGAT................................................   read_151206_0_1_0_0_0_0        OTHER            1        50.00            1       100.00            0         0.00                        19   
.........GGTTCCTGGCATGCTGATT...............................................   read_195731_0_0_0_0_1_0        OTHER            1        50.00            0         0.00            1       100.00                        19   
                                                                                                                     ----------                ----------                ----------   
                                                                                                                              2                         1                         1                                          
                                                                                                                                                  (50.00)                   (50.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE             105              45             150          98.68%
          OTHER               1               1               2           1.32%
                     ----------      ----------      ----------                
                            106              46             152                



[END]
