[BEGIN]
REFERENCE HAIRPIN
***********************************************************************************************************************************
ID : mmu-mir-223
DESCRIPTION : mmu-mir-223 MI0000703 Mus musculus miR-223 stem-loop
CHROMOSOME : X
SPAN : 93438156 - 93438265
LENGTH : 110
SEQUENCE : TCTGGCCATCTGCAGTGTCACGCTCCGTGTATTTGACAAGCTGAGTTGGACACTCTGTGTGGTAGAGTGTCAGTTTGTCAAATACCCCAAGTGTGGCTCATGCCTATCAG
OVERHANG THRESHOLD : 75%
***********************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-223
ACCID : MI0000703
PARENT : mmu-mir-223
CHROMOSOME : X
START : 93438156
STOP : 93438265
OFFSET : 68..89
SEQUENCE : TGTCAGTTTGTCAAATACCCCA
STRAND : +
******************************
*** MATURE ***
______________________________________________________________________________________________________________
TCTGGCCATCTGCAGTGTCACGCTCCGTGTATTTGACAAGCTGAGTTGGACACTCTGTGTGGTAGAGTGTCAGTTTGTCAAATACCCCAAGTGTGGCTCATGCCTATCAG REF X 93438156 - 93438265
TGTCAGTTTGTCAAATACCCCA MATURE X 93438224 - 93438354 mmu-miR-223 +
______________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....................................................................GTCAGTTTGTCAAATACCCCAA..................... read_67742_37_40_48_6_4_5 MATURE 140 31.67 125 31.65 15 31.91 22
....................................................................GTCAGTTTGTCAAATACCCCA...................... read_204521_40_36_37_2_7_4 MATURE 126 28.51 113 28.61 13 27.66 21
....................................................................GTCAGTTTGTCAAATACCCCAt..................... read_353592_11_16_15_0_0_1 MATURE 43 9.73 42 10.63 1 2.13 t 21
....................................................................GTCAGTTTGTCAAATACCCCAAt.................... read_284160_7_13_8_2_2_2 MATURE 34 7.69 28 7.09 6 12.77 t 22
....................................................................GTCAGTTTGTCAAATACCCC....................... read_10403_5_6_2_2_0_1 MATURE 16 3.62 13 3.29 3 6.38 20
....................................................................GTCAGTTTGTCAAATACCC........................ read_87507_5_4_1_0_0_0 MATURE 10 2.26 10 2.53 0 0.00 19
....................................................................GTCAGTTTGTCAAATACC......................... read_394949_1_1_2_0_1_2 MATURE 7 1.58 4 1.01 3 6.38 18
....................................................................GTCAGTTTGTCAAATACCCCAta.................... read_178176_3_2_2_0_0_0 MATURE 7 1.58 7 1.77 0 0.00 ta 21
....................................................................GTCAGTTTGTCAAATACCCCAAa.................... read_88060_1_2_0_0_0_1 MATURE 4 0.90 3 0.76 1 2.13 a 22
....................................................................GTCAGTTTGTCAAATACCCCAg..................... read_1188_0_2_2_0_0_0 MATURE 4 0.90 4 1.01 0 0.00 g 21
....................................................................GTCAGTTTGTCAAATACCCCAtaa................... read_357998_2_0_1_0_0_0 MATURE 3 0.68 3 0.76 0 0.00 taa 21
....................................................................GTCAGTTTGTCAAATACCCa....................... read_247818_0_1_2_0_0_0 MATURE 3 0.68 3 0.76 0 0.00 a 19
....................................................................GTCAGTTTGTCAAAgACCCCAA..................... read_371155_3_0_0_0_0_0 MATURE 3 0.68 3 0.76 0 0.00 14G7
....................................................................GTCAGTTTGTCAAATACCa........................ read_117097_0_2_1_0_0_0 MATURE 3 0.68 3 0.76 0 0.00 a 18
....................................................................GTCAGTTTGTCAAATACCCt....................... read_34987_0_2_1_0_0_0 MATURE 3 0.68 3 0.76 0 0.00 t 19
....................................................................GTCAGTTTGTCAAATACCCCt...................... read_346347_0_2_0_0_0_0 MATURE 2 0.45 2 0.51 0 0.00 t 20
....................................................................GTCAGTTTGTCAAAgACCCCAAt.................... read_30603_2_0_0_0_0_0 MATURE 2 0.45 2 0.51 0 0.00 t 14G7
......................................................................CAGTTTGTCAAATACCCCAA..................... read_203573_1_1_0_0_0_0 MATURE 2 0.45 2 0.51 0 0.00 20
....................................................................GTtAGTTTGTCAAATACCCCAA..................... read_361374_0_1_0_0_0_1 MATURE 2 0.45 1 0.25 1 2.13 2T19
....................................................................GTCAGTTTGTCAAATACCCCAtt.................... read_311125_0_1_0_0_1_0 MATURE 2 0.45 1 0.25 1 2.13 tt 21
....................................................................GTCAGTTTGTCAAgTACCCCA...................... read_350152_0_1_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 13G7
....................................................................tTCAGTTTGTCAAATACCCCA...................... read_22958_0_0_1_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 20
....................................................................GTCAGTTTGTCAAATACCCact..................... read_90852_0_0_0_0_1_0 MATURE 1 0.23 0 0.00 1 2.13 act 19
....................................................................GTCAGTTTGTCAAATACCCCg...................... read_226180_0_1_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 g 20
....................................................................GTCAtTTTGTCAAATACCCCAA..................... read_72875_0_0_1_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 4T17
....................................................................GTCAGgTTGTCAAATACCCCAta.................... read_299180_0_0_1_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 ta 5G15
....................................................................GTCAGTTTGTCAAATACCCCAttaa.................. read_325337_1_0_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 ttaa 21
....................................................................GTCAGTTTGTCAAATACCaCAAt.................... read_279018_1_0_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 t 18A3
....................................................................GTCAGTTTGTCAAATACCCCAttta.................. read_250220_0_0_0_0_1_0 MATURE 1 0.23 0 0.00 1 2.13 ttta 21
....................................................................GTCAGTTTGTCAAATACCCaAA..................... read_324891_0_1_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 19A2
....................................................................GTCAGTTTGTCAAATACCCac...................... read_341269_1_0_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 ac 19
....................................................................GTCAGTTTGTCAAATACCCat...................... read_409438_0_1_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 at 19
....................................................................cTCAGTTTGTCAAATACCCCAA..................... read_359902_0_1_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 21
....................................................................GTCAGTTTGTCAAATACCaCAA..................... read_209850_0_0_0_1_0_0 MATURE 1 0.23 0 0.00 1 2.13 18A3
....................................................................GTCAGTTTGTCAAATACCCCta..................... read_310798_0_0_1_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 ta 20
....................................................................GTCAGTTTGTCAAAaACCCCAA..................... read_149881_1_0_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 14A7
....................................................................GTCAGTTTGTCAAAgACCCCA...................... read_46334_1_0_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 14G6
....................................................................GTCAGTTTGTCAAATACCCCttaa................... read_78995_0_0_1_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 ttaa 20
....................................................................GTCAGTTTGTCAAATACCCCAga.................... read_16457_1_0_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 ga 21
.....................................................................TCAGTTTGTCAAATACCCCAA..................... read_251137_0_1_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 21
....................................................................GTCAGTTTGTCAAATACCCCAAaa................... read_71938_0_1_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 aa 22
....................................................................GTCAGTTTGTCAgATACCCCA...................... read_208266_0_0_1_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 12G8
....................................................................GTCAGTTTGTCAAAcACCCCAA..................... read_262717_1_0_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 14C7
....................................................................GTaAGTTTGTCAAATACCCCAA..................... read_229448_1_0_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 2A19
....................................................................GTCAGTTTGTCAAATACCCCAtat................... read_391297_0_0_1_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 tat 21
....................................................................GTCAtTTTGTCAAATACCCCAt..................... read_132505_0_1_0_0_0_0 MATURE 1 0.23 1 0.25 0 0.00 t 4T16
---------- ---------- ----------
442 395 47
(89.37) (10.63)
*** OTHER ***
______________________________________________________________________________________________________________
TCTGGCCATCTGCAGTGTCACGCTCCGTGTATTTGACAAGCTGAGTTGGACACTCTGTGTGGTAGAGTGTCAGTTTGTCAAATACCCCAAGTGTGGCTCATGCCTATCAG REF X 93438156 - 93438265
TGTCAGTTTGTCAAATACCCCA MATURE X 93438224 - 93438354 mmu-miR-223 +
______________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................GTGTATTTGACAAGCTGAGTTG............................................................... read_298393_1_0_0_0_0_0 OTHER 1 100.00 1 100.00 0 0 22
---------- ---------- ----------
1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 395 47 442 99.77%
OTHER 1 0 1 0.23%
---------- ---------- ----------
396 47 443
[END]