[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************************************
ID : mmu-mir-221
DESCRIPTION : mmu-mir-221 MI0000709 Mus musculus miR-221 stem-loop
CHROMOSOME : X
SPAN : 18723420 - 18723514
LENGTH : 95
SEQUENCE : ATCCAGGTCTGGGGCATGAACCTGGCATACAATGTAGATTTCTGTGTTTGTTAGGCAACAGCTACATTGTCTGCTGGGTTTCAGGCTACCTGGAA
OVERHANG THRESHOLD : 75%
********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-221
ACCID : MI0000709
PARENT : mmu-mir-221
CHROMOSOME : X
START : 18723420
STOP : 18723514
OFFSET : 60..82
SEQUENCE : AGCTACATTGTCTGCTGGGTTTC
STRAND : -
******************************
*** MATURE ***
_______________________________________________________________________________________________
ATCCAGGTCTGGGGCATGAACCTGGCATACAATGTAGATTTCTGTGTTTGTTAGGCAACAGCTACATTGTCTGCTGGGTTTCAGGCTACCTGGAA REF X 18723420 - 18723514
AGCTACATTGTCTGCTGGGTTTC MATURE X 18723480 - 18723596 mmu-miR-221 -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............................................................GCTACATTGTCTGCTGGGTTT............... read_83100_271_305_266_202_232_225 MATURE 1501 45.24 842 43.83 659 47.17 21
............................................................GCTACATTGTCTGCTGGGTTTt.............. read_35044_60_84_66_28_58_46 MATURE 342 10.31 210 10.93 132 9.45 t 21
............................................................GCTACATTGTCTGCTGGGTTTC.............. read_63522_52_65_40_41_43_48 MATURE 289 8.71 157 8.17 132 9.45 22
............................................................GCTACATTGTCTGCTGGGTT................ read_138760_53_49_29_28_30_33 MATURE 222 6.69 131 6.82 91 6.51 20
............................................................GCTACATTGTCTGCTGGGT................. read_397586_23_19_20_19_22_18 MATURE 121 3.65 62 3.23 59 4.22 19
............................................................GCTACATTGTCTGCTGGGTTTCt............. read_135921_26_29_22_9_11_12 MATURE 109 3.29 77 4.01 32 2.29 t 22
............................................................GCTACATTGTCTGCTGGGTTTCA............. read_271121_18_16_14_10_6_10 MATURE 74 2.23 48 2.50 26 1.86 23
............................................................GCTACATTGTCTGCTGGGTTTa.............. read_366336_14_14_6_8_3_8 MATURE 53 1.60 34 1.77 19 1.36 a 21
............................................................GCTACATTGTCTGCTGGGTTa............... read_65638_11_8_12_2_7_5 MATURE 45 1.36 31 1.61 14 1.00 a 20
............................................................GCTACATTGTCTGCTGGGTTTtt............. read_52252_9_5_10_3_2_5 MATURE 34 1.02 24 1.25 10 0.72 tt 21
............................................................GCTACATTGTCTGaTGGGTTT............... read_12947_1_8_5_0_4_8 MATURE 26 0.78 14 0.73 12 0.86 13A7
............................................................GCTACATTGTCTGCTtGGTTT............... read_342367_0_6_6_2_7_5 MATURE 26 0.78 12 0.62 14 1.00 15T5
............................................................GCTACATTGTCTGCTGGGTTTaa............. read_121247_7_1_4_2_3_4 MATURE 21 0.63 12 0.62 9 0.64 aa 21
............................................................GCTACATTGTCTGCTGGtTTT............... read_401508_1_7_3_0_3_2 MATURE 16 0.48 11 0.57 5 0.36 17T3
............................................................GCTACATTGTCTGCTGGGTTat.............. read_159997_3_8_3_0_0_1 MATURE 15 0.45 14 0.73 1 0.07 at 20
............................................................GCTACATTGTCTGCTGGGTTTCAa............ read_143702_1_2_3_0_2_5 MATURE 13 0.39 6 0.31 7 0.50 a 23
............................................................GCTACATTGTCTGCTGGGTTc............... read_3178_4_6_2_0_0_0 MATURE 12 0.36 12 0.62 0 0.00 c 20
............................................................GCTACATTGTCTGCTGG................... read_260900_0_0_0_3_3_6 MATURE 12 0.36 0 0.00 12 0.86 17
...............................................................ACATTGTCTGCTGGGTTT............... read_55748_2_0_0_1_7_1 MATURE 11 0.33 2 0.10 9 0.64 18
............................................................GCTACATTGTCTGCTGGGTTTg.............. read_166251_3_4_0_1_1_2 MATURE 11 0.33 7 0.36 4 0.29 g 21
............................................................GCTACATTGTCTGCTGGGTTTat............. read_281416_1_7_0_0_1_1 MATURE 10 0.30 8 0.42 2 0.14 at 21
............................................................GCTACATTGTCTGaTGGGTTTt.............. read_306541_1_1_3_0_2_2 MATURE 9 0.27 5 0.26 4 0.29 t 13A7
............................................................GCTACATTGTCTGCTGGGTat............... read_406288_2_4_1_0_2_0 MATURE 9 0.27 7 0.36 2 0.14 at 19
............................................................GCTACATTGTCTGCTGGGTTTCg............. read_248616_2_3_0_1_3_0 MATURE 9 0.27 5 0.26 4 0.29 g 22
............................................................GCTACATTGTCTGCTGGG.................. read_350893_1_0_0_1_3_3 MATURE 8 0.24 1 0.05 7 0.50 18
............................................................GCTACATTGTCTGCTGGGTTTag............. read_101704_2_2_1_1_1_1 MATURE 8 0.24 5 0.26 3 0.21 ag 21
............................................................GCTACATTGTCTtCTGGGTTT............... read_117351_2_0_0_2_2_2 MATURE 8 0.24 2 0.10 6 0.43 12T8
............................................................GCTACATTGTCTGCaGGGTTT............... read_125388_7_0_0_0_0_0 MATURE 7 0.21 7 0.36 0 0.00 14A6
............................................................GCTACATTGTCTGCTGGGTTaa.............. read_91924_3_1_2_0_0_0 MATURE 6 0.18 6 0.31 0 0.00 aa 20
............................................................GCTACATTGTCTGCTGGGTaa............... read_185940_2_1_1_0_1_1 MATURE 6 0.18 4 0.21 2 0.14 aa 19
............................................................GCTACATTGTCTGCTGGGTTTta............. read_160699_1_1_2_1_1_0 MATURE 6 0.18 4 0.21 2 0.14 ta 21
............................................................GCTACATTGTCTGCcGGGTTT............... read_357316_5_0_1_0_0_0 MATURE 6 0.18 6 0.31 0 0.00 14C6
............................................................GCTACATTGTCTGCTGGGTTTaaa............ read_404747_1_0_0_1_2_2 MATURE 6 0.18 1 0.05 5 0.36 aaa 21
............................................................GCTACATTGTCTGCTGGGa................. read_270799_3_2_0_0_0_0 MATURE 5 0.15 5 0.26 0 0.00 a 18
............................................................GCTACATTGTCTGCTtGGTTTC.............. read_275017_0_2_1_1_0_1 MATURE 5 0.15 3 0.16 2 0.14 15T6
................................................................CATTGTCTGCTGGGTTT............... read_386882_0_0_0_3_1_1 MATURE 5 0.15 0 0.00 5 0.36 17
............................................................GCTACATTGTCTGCTGGtTT................ read_406740_0_2_1_1_0_1 MATURE 5 0.15 3 0.16 2 0.14 17T2
............................................................GCTACATTGTCTGCTGGGTTg............... read_357579_0_0_1_0_0_4 MATURE 5 0.15 1 0.05 4 0.29 g 20
............................................................GCTACATTGTCTGCTtGGTTTt.............. read_298570_0_1_1_0_1_1 MATURE 4 0.12 2 0.10 2 0.14 t 15T5
............................................................GCTACATTGTCTGCTGGGTTct.............. read_43754_0_1_1_2_0_0 MATURE 4 0.12 2 0.10 2 0.14 ct 20
............................................................GCTACATTGTCTGCTGGGTa................ read_194808_2_0_1_0_0_1 MATURE 4 0.12 3 0.16 1 0.07 a 19
............................................................GCTACATTGTCTaCTGGGTTT............... read_94796_0_1_1_2_0_0 MATURE 4 0.12 2 0.10 2 0.14 12A8
............................................................GCTACATTGTCTtCTGGGTT................ read_60766_1_2_0_0_0_1 MATURE 4 0.12 3 0.16 1 0.07 12T7
............................................................GCTACATTGTCTGCTGGtTTTC.............. read_264426_0_0_3_1_0_0 MATURE 4 0.12 3 0.16 1 0.07 17T4
............................................................GCTACATTGTCTGCTGGGTTTgt............. read_334243_2_2_0_0_0_0 MATURE 4 0.12 4 0.21 0 0.00 gt 21
............................................................GCTACATTGTCTGCTGGtTTTt.............. read_180626_2_0_1_0_1_0 MATURE 4 0.12 3 0.16 1 0.07 t 17T3
............................................................GCTACATTGTCTGCTGGGTTag.............. read_369575_1_1_1_1_0_0 MATURE 4 0.12 3 0.16 1 0.07 ag 20
............................................................GCTACATTGTCTGCTGGGTTTtaa............ read_118123_0_1_1_1_0_0 MATURE 3 0.09 2 0.10 1 0.07 taa 21
............................................................GCTACATTGTCTGCTGGGTTTCtaa........... read_190412_0_0_0_0_1_2 MATURE 3 0.09 0 0.00 3 0.21 taa 22
............................................................GCTACATTGTCTGCTGGGTTgt.............. read_166807_1_1_0_0_0_1 MATURE 3 0.09 2 0.10 1 0.07 gt 20
............................................................GCTACATTGTCTGCTtGGTT................ read_252690_0_0_1_0_1_1 MATURE 3 0.09 1 0.05 2 0.14 15T4
............................................................GCTACATTGTCTGaTGGGTT................ read_79352_2_0_0_0_1_0 MATURE 3 0.09 2 0.10 1 0.07 13A6
............................................................GCTACATTGTCTGCTGGGTTTCtt............ read_31876_1_1_0_1_0_0 MATURE 3 0.09 2 0.10 1 0.07 tt 22
............................................................GCTACATTGTCTtCTGGGTTTC.............. read_216079_1_1_0_0_1_0 MATURE 3 0.09 2 0.10 1 0.07 12T9
............................................................GCTACATTGTCTGCTGGGaTT............... read_400488_1_1_0_0_1_0 MATURE 3 0.09 2 0.10 1 0.07 18A2
...............................................................ACATTGTCTGCTGGGTT................ read_111344_0_0_0_0_2_1 MATURE 3 0.09 0 0.00 3 0.21 17
............................................................GCTACATTGcCTGCTGGGTTT............... read_157019_0_1_0_0_1_1 MATURE 3 0.09 1 0.05 2 0.14 9C11
...........................................................AGCTACATTGTCTGCTGGGTTT............... read_369615_1_0_0_1_0_1 MATURE 3 0.09 1 0.05 2 0.14 22
............................................................GCTACATTGTCTGCTGGGTct............... read_281435_0_1_2_0_0_0 MATURE 3 0.09 3 0.16 0 0.00 ct 19
............................................................GCTACATTGTCTGaTGGGTTTCt............. read_203343_0_1_1_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 t 13A8
............................................................GCTACATTtTCTGCTGGGTTTt.............. read_149799_0_2_0_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 t 8T12
............................................................GCTACATTGTCTGCTGGtTTTg.............. read_286460_0_0_0_0_2_0 MATURE 2 0.06 0 0.00 2 0.14 g 17T3
............................................................GCTACATTGTCTGCTGGGTTTtat............ read_404601_0_1_0_0_1_0 MATURE 2 0.06 1 0.05 1 0.07 tat 21
............................................................GCTACATTGTCTGCcGGGTTTC.............. read_231097_1_0_0_0_0_1 MATURE 2 0.06 1 0.05 1 0.07 14C7
............................................................GCTACATTGTCTGCTGGGTTTttaa........... read_21438_1_0_0_0_1_0 MATURE 2 0.06 1 0.05 1 0.07 ttaa 21
............................................................GCcACATTGTCTGCTGGGTTT............... read_160409_0_0_1_0_0_1 MATURE 2 0.06 1 0.05 1 0.07 2C18
............................................................GCTACATTGTCTGCcGGGTT................ read_290345_1_1_0_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 14C5
............................................................GCTACATTGTCTGCTtGGTTTCt............. read_40096_0_1_0_1_0_0 MATURE 2 0.06 1 0.05 1 0.07 t 15T6
............................................................GCTACATTtTCTGCTGGGTTT............... read_215825_0_0_1_0_0_1 MATURE 2 0.06 1 0.05 1 0.07 8T12
............................................................GCTACATTGTCTGCTGGGTgt............... read_412237_0_1_0_0_1_0 MATURE 2 0.06 1 0.05 1 0.07 gt 19
............................................................GCTACAcTGTCTGCTGGGTTT............... read_146838_0_0_1_0_0_1 MATURE 2 0.06 1 0.05 1 0.07 6C14
............................................................GCTACATTGTCTGCTGGGTTTCta............ read_148726_1_0_0_1_0_0 MATURE 2 0.06 1 0.05 1 0.07 ta 22
............................................................GCTACAcTGTCTGCTGGGTTTCt............. read_229384_0_1_1_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 t 6C15
............................................................GCTACATTGTCTGCaGGGTTTCt............. read_153618_2_0_0_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 t 14A7
............................................................GCTAtATTGTCTGCTGGGTTT............... read_97317_0_1_0_0_1_0 MATURE 2 0.06 1 0.05 1 0.07 4T16
............................................................GCTACATTGTCTGCTGGGTTTga............. read_159486_0_0_1_1_0_0 MATURE 2 0.06 1 0.05 1 0.07 ga 21
............................................................GCTACATTGTCTGtTGGGTTT............... read_366610_1_0_1_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 13T7
............................................................GCTACATTGTCTGCTGGGat................ read_281248_0_1_0_0_1_0 MATURE 2 0.06 1 0.05 1 0.07 at 18
............................................................GCTACATTGTCTGCTGGGTTTtc............. read_193181_0_0_1_0_1_0 MATURE 2 0.06 1 0.05 1 0.07 tc 21
............................................................GCTACATTGTCTGgTGGGTTT............... read_340681_0_1_1_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 13G7
............................................................GCTACATTGTCTGCTGGGgTT............... read_339008_0_0_1_0_0_1 MATURE 2 0.06 1 0.05 1 0.07 18G2
............................................................GCTACATTGTCTGCTGGGTTTtta............ read_188266_0_0_2_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 tta 21
............................................................GCTACATTGTCTGCgGGGTTT............... read_392690_1_0_1_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 14G6
............................................................GCTACATTGTaTGCTGGGTTTC.............. read_370660_0_0_2_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 10A11
............................................................GCTACATTGTCTGCTGGGTTga.............. read_125580_0_0_2_0_0_0 MATURE 2 0.06 2 0.10 0 0.00 ga 20
............................................................GCTACATTGTCTGCTGGGTTTCAt............ read_338994_0_1_0_0_0_1 MATURE 2 0.06 1 0.05 1 0.07 t 23
............................................................GCTACATTGTCTGCTGGGTga............... read_153547_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 ga 19
............................................................GCTACATTGTCTGCcGGGTTTtt............. read_284219_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 tt 14C6
............................................................GCTACATTGTCTGCTGGGgTTC.............. read_228952_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 18G3
............................................................GCTACATTGTCTGCTGGtTTTtt............. read_57448_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 tt 17T3
..........................................................CAGCTACATTGTCTGCTGGGTT................ read_149234_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 22
............................................................GCTACATTGTCTGCTGGGTTTtgc............ read_184149_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 tgc 21
............................................................GCTACATTGTCTGCTGGGaat............... read_262822_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 aat 18
............................................................cCTACATTGTCTGCTGGGTT................ read_214212_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 19
............................................................GCTACATTGTCTGCTGGGTTTtcttt.......... read_187881_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 tcttt 21
............................................................GCTACATTGTCTGCTGGGTTTtAG............ read_320127_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 21T2
............................................................GCTACATTGTCTtCTGGGTTTCg............. read_310294_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 g 12T9
............................................................GCTtCATTGTCTGCTGGGTTTt.............. read_37927_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 t 3T17
............................................................GCTACATTGcCTGCTGGGTTTa.............. read_126786_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 a 9C11
............................................................GCTACATTGTCTGCTGGGTTaaa............. read_337995_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 aaa 20
............................................................GCTACATTGTCTGCTGGGcTT............... read_173033_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 18C2
............................................................GCTACATTGTCTGCTGGGaaa............... read_140157_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 aaa 18
............................................................GCTACATTGTCTGCTGGGTTTata............ read_365906_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 ata 21
............................................................GCTACAaTGTCTGCTGGGTTT............... read_259468_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 6A14
...........................................................AGCTACATTGTCTGCTGGGT................. read_165001_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 20
............................................................GCTACATTGTCTGCTGGtTTTCt............. read_136527_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 t 17T4
.........................................................gCAGCTACATTGTCTGCTGGGTTT............... read_187690_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 23
............................................................GCTACATTGTCTGCTGGGTTTCga............ read_27589_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 ga 22
............................................................GCTACATTGTCTGCTGGGTTTtg............. read_318266_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 tg 21
............................................................GCTACATTGTCTcCTGGGTTTC.............. read_334554_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 12C9
............................................................GCTACATTGTCTaCTGGGTTTCt............. read_91067_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 12A9
............................................................GCTACATTGTCTGCTGGGcTTt.............. read_162579_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 18C2
............................................................aCTACATTGTCTGCTGGGTT................ read_175174_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 19
............................................................GCTACATTGTCTGCTGGGTTTaaaa........... read_387251_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 aaaa 21
............................................................GCTACATTGTCTGCTGGGaa................ read_147470_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 aa 18
................................................................CATTGTCTGCTGGGTTTC.............. read_271802_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 18
............................................................GCTACATTGTCTGCTGGGTTca.............. read_350019_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 ca 20
............................................................GCTACATTGTCTGCTGGGTTTttt............ read_6521_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 ttt 21
............................................................GCTACATTGTCTGCTGGGTg................ read_318698_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 g 19
............................................................GCTACATTGTCTGCTtGGTTTa.............. read_130559_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 a 15T5
............................................................GCTACATTGTCTGCgGGGTTTCt............. read_271898_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 14G7
............................................................GCTACATcGTCTGCTGGGTT................ read_220597_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 7C12
............................................................GCTACATTGTCTGCTGGGTTatta............ read_305957_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 atta 20
............................................................GCTACATTGTCcGCTGGGTTT............... read_153556_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 11C9
............................................................GCTACATTGTCTGCTGtGTT................ read_117571_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 16T3
............................................................GCTACATTaTCTGCTGGGTTT............... read_207530_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 8A12
............................................................GCTACATTGTCTGCTGGGTTTCAG............ read_329056_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 24
............................................................GCTACATTGTCTGCTGGGTTTCtc............ read_372527_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 tc 22
................................................................CATTGTCTGCTGGGTTTCt............. read_168824_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 t 18
............................................................GCTAaATTGTCTGCTGGGTTT............... read_173592_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 4A16
............................................................GCcACATTGTCTGCTGGGTT................ read_309420_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 2C17
............................................................GCTACATTGTtTGCTGGGTTTCA............. read_53830_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 10T12
............................................................GCTACATTGTCTGCTGGGTTcct............. read_347395_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 cct 20
............................................................GCTAgATTGTCTGCTGGGTTT............... read_310896_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 4G16
............................................................GCTACATTGTCTGaTGGGTTTC.............. read_177807_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 13A8
............................................................GCTgCATTGTCTGCTGGGTTTt.............. read_1209_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 t 3G17
............................................................GCTcCATTGTCTGCTGGGTTT............... read_241936_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 3C17
............................................................GCTACATTtTCTGCTGGGTTTC.............. read_129888_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 8T13
............................................................GCTACATTGcCTGCTGGGTTTCt............. read_179503_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 t 9C12
...........................................................AGCTACATTGTCTGCTGGGTTTtt............. read_181326_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 tt 22
............................................................GCTACATTGTCTGCTGGtTTTCA............. read_369515_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 17T5
............................................................GCTACATTGTCTGCTGGGTag............... read_240157_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 ag 19
...............................................................ACATTGTCTGCTGGGTTTaaa............ read_15529_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 aaa 18
............................................................GCTACATcGTCTGCTGGGTTTCt............. read_124523_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 7C14
............................................................aCTACATTGTCTGCTGGGTTTt.............. read_78981_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 20
............................................................GCTACATTGTCTGCgGGGTTTC.............. read_277485_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 14G7
............................................................aCTACATTGTCTGCTGGGTTT............... read_209013_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 20
............................................................GCgACATTGTCTGCTGGGTTTC.............. read_192764_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 2G19
............................................................GCTACATTGTCTGCTaGGTTTCt............. read_82949_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 15A6
............................................................GCTACAcTGTCTGCTGGGTT................ read_142512_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 6C13
............................................................GCTACATTtTCTGCTGGGTTTa.............. read_325168_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 a 8T12
............................................................GCTACATTGTCTGCTGGGTaaa.............. read_264865_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 aaa 19
............................................................GCTACATTGTCTGCTGGGTTTaga............ read_311172_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 aga 21
............................................................GCTACATTGTCTGCTGGGTTcat............. read_356946_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 cat 20
.................................................................ATTGTCTGCTGGGTTTCAa............ read_365290_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 a 18
...............................................................ACATTGTCTGCTGGGTTTtta............ read_167762_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 tta 18
.................................................................ATTGTCTGCTGGGTTTCA............. read_211962_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 18
............................................................GCTACgTTGTCTGCTGGGTTTCtt............ read_81943_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 tt 5G16
............................................................GCTACATTGTCTGCTGGcTTT............... read_247074_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 17C3
............................................................GCTACATTGTCTcCTGGGTTTt.............. read_39417_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 12C8
............................................................GCTAaATTGTCTGCTGGGTT................ read_258911_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 4A15
............................................................GCTACAcTGTCTGCTGGGTTTt.............. read_162468_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 6C14
............................................................GCTACATTGTCTGCTGGGTTTCttt........... read_177298_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 ttt 22
............................................................GCTACATTGTCTcCTGGGTT................ read_41887_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 12C7
............................................................GCTACATTGTCTGCTGGGTgtaa............. read_223442_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 gtaa 19
...............................................................ACATTGTCTGCTGGGTTTCt............. read_294528_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 t 19
............................................................GCTACgTTGTCTGCTGGGTTT............... read_361135_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 5G15
............................................................GCTACATTaTCTGCTGGGTT................ read_167407_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 8A11
............................................................GCTACATTGTCTGCTGGGgTTt.............. read_406669_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 18G2
............................................................GCTACATTGTCTGCTGGGTTTaat............ read_381158_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 aat 21
...........................................................AGCTACATTGTCTGCTGGGTTTCt............. read_132102_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 t 23
............................................................GCTACATTGTCTGCTGGGgTTtt............. read_299924_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 tt 18G2
...............................................................ACATTGTCTGCTGGGTTTC.............. read_46678_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 19
............................................................GCTACATTGTCTGtTGGGTT................ read_25290_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 13T6
............................................................GCTACATTGaCTGCTGGGTTT............... read_268733_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 9A11
............................................................GCTACATTGTCTGCTGGaTT................ read_36107_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 17A2
............................................................GCTACATTGTCcGCTGGGTTTt.............. read_191598_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 t 11C9
............................................................GCTACATTGTCTGCTGGGTTTCAaa........... read_230314_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 aa 23
...........................................................AGCTACATTGTCTGCTGGGTTTt.............. read_86120_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 t 22
...........................................................AGCTACATTGTCTGCTGGGTTTCA............. read_104702_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 24
............................................................GCTACATTGTCTGCgGGGTTTCAa............ read_411941_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 a 14G8
............................................................GCTACATTGTCgGCTGGGTTTa.............. read_389969_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 a 11G9
............................................................GCTACATTGTCTGCTGGGTTaat............. read_290729_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 aat 20
............................................................cCTACATTGTCTGCTGGGTa................ read_218539_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 a 18
............................................................GCTACATTGTCTtCTGGGTTTCA............. read_247923_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 12T10
............................................................GCTACATTGTCTaCTGGGTTTC.............. read_314468_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 12A9
..............................................................TACATTGTCTGCTGGGTTTC.............. read_295355_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 20
............................................................GCTACgTTGTCTGCTGGGTTTC.............. read_191681_0_0_0_1_0_0 MATURE 1 0.03 0 0.00 1 0.07 5G16
...............................................................ACATTGTCTGCTGGGTTTCA............. read_135835_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 20
............................................................GCTACATcGTCTGCTGGGTTT............... read_178787_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 7C13
............................................................GCTACgTTGTCTGCTGGGTTTt.............. read_197317_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 5G15
............................................................cCTACATTGTCTGCTGGGTTT............... read_232167_0_0_1_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 20
............................................................GCTACATcGTCTGCTGGGTTTC.............. read_32799_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 7C14
............................................................GCTACATTGTCTtCTGGGTTTCt............. read_149703_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 12T9
............................................................GCTACAcTGTCTGCTGGGTTTCA............. read_317128_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 6C16
............................................................GCTACATTGTCTGCTGGtTTTat............. read_212747_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 at 17T3
............................................................GCTACATTGTCTGCaGGGTTTt.............. read_184609_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 14A6
............................................................GCTACATTGTCTGCTGcGTTT............... read_265383_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 16C4
............................................................GCTACATTGTCTGtTGGGTTTt.............. read_407443_1_0_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 t 13T7
............................................................GCTACATTGTCTGaTGGGTTTat............. read_10690_0_1_0_0_0_0 MATURE 1 0.03 1 0.05 0 0.00 at 13A7
...............................................................ACATTGTCTGCTGGGTTTa.............. read_274815_0_0_0_0_0_1 MATURE 1 0.03 0 0.00 1 0.07 a 18
............................................................cCTACATTGTCTGCTGGtTTTCAt............ read_109989_0_0_0_0_1_0 MATURE 1 0.03 0 0.00 1 0.07 t 16T5
---------- ---------- ----------
3318 1921 1397
(57.90) (42.10)
*** OTHER ***
_______________________________________________________________________________________________
ATCCAGGTCTGGGGCATGAACCTGGCATACAATGTAGATTTCTGTGTTTGTTAGGCAACAGCTACATTGTCTGCTGGGTTTCAGGCTACCTGGAA REF X 18723420 - 18723514
AGCTACATTGTCTGCTGGGTTTC MATURE X 18723480 - 18723596 mmu-miR-221 -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....................CCTGGCATACAATGTAGATTTC...................................................... read_377572_2_1_2_0_0_0 OTHER 5 22.73 5 35.71 0 0.00 22
....................CCTGGCATACAATGTAGATTT....................................................... read_70479_1_0_1_1_1_1 OTHER 5 22.73 2 14.29 3 37.50 21
....................CCTGGCATACAATGTAGATT........................................................ read_93804_0_2_0_0_0_1 OTHER 3 13.64 2 14.29 1 12.50 20
....................CCTGGCATACAATGTAG........................................................... read_392301_0_0_0_0_1_0 OTHER 1 4.55 0 0.00 1 12.50 17
....................CCTGGCATACAATGaAGATTT....................................................... read_109892_1_0_0_0_0_0 OTHER 1 4.55 1 7.14 0 0.00 14A6
....................CCTGGCATACAATGTAGATTcc...................................................... read_377_0_0_1_0_0_0 OTHER 1 4.55 1 7.14 0 0.00 cc 20
....................CCTGGCATACAATGTAGATTTCTGT................................................... read_70179_0_0_0_0_1_0 OTHER 1 4.55 0 0.00 1 12.50 25
....................CCTGGCATACAATGTAGATTTa...................................................... read_8831_0_1_0_0_0_0 OTHER 1 4.55 1 7.14 0 0.00 a 21
....................CCTGGCATACAATGTAGATTTCTGc................................................... read_373478_0_1_0_0_0_0 OTHER 1 4.55 1 7.14 0 0.00 c 24
....................CCTGGCATACAATGTgGATTTCTGT................................................... read_29246_0_0_0_0_0_1 OTHER 1 4.55 0 0.00 1 12.50 15G9
....................CCTGGCATACAATGTAGATTTCTG.................................................... read_314704_0_0_0_0_1_0 OTHER 1 4.55 0 0.00 1 12.50 24
....................CCTaGCATACAATGTAGATTTC...................................................... read_37297_0_1_0_0_0_0 OTHER 1 4.55 1 7.14 0 0.00 3A18
---------- ---------- ----------
22 14 8
(63.64) (36.36)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1921 1397 3318 99.34%
OTHER 14 8 22 0.66%
---------- ---------- ----------
1935 1405 3340
[END]