[BEGIN]

REFERENCE HAIRPIN
***********************************************************************************************************************************
ID                 : mmu-mir-214
DESCRIPTION        : mmu-mir-214 MI0000698 Mus musculus miR-214 stem-loop
CHROMOSOME         : 1
SPAN               : 164153499 - 164153608
LENGTH             : 110
SEQUENCE           : GGCCTGGCTGGACAGAGTTGTCATGTGTCTGCCTGTCTACACTTGCTGTGCAGAACATCCGCTCACCTGTACAGCAGGCACAGACAGGCAGTCACATGACAACCCAGCCT
OVERHANG THRESHOLD : 75%
***********************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-214
ACCID      : MI0000698
PARENT     : mmu-mir-214
CHROMOSOME : 1
START      : 164153499
STOP       : 164153608
OFFSET     : 71..92
SEQUENCE   : ACAGCAGGCACAGACAGGCAGT
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-214*
ACCID      : MI0000698
PARENT     : mmu-mir-214
CHROMOSOME : 1
START      : 164153499
STOP       : 164153608
OFFSET     : 30..51
SEQUENCE   : TGCCTGTCTACACTTGCTGTGC
STRAND     : +
******************************



*** MATURE ***
______________________________________________________________________________________________________________
GGCCTGGCTGGACAGAGTTGTCATGTGTCTGCCTGTCTACACTTGCTGTGCAGAACATCCGCTCACCTGTACAGCAGGCACAGACAGGCAGTCACATGACAACCCAGCCT REF                  1                    164153499 - 164153608 
                                                                      ACAGCAGGCACAGACAGGCAGT                   MATURE               1                    164153570 - 164153700 mmu-miR-214          +                    
                             TGCCTGTCTACACTTGCTGTGC                                                            MATURESTAR           1                    164153529 - 164153659 mmu-miR-214*         +                    
______________________________________________________________________________________________________________

                                                                                                          -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
......................................................................ACAGCAGGCACAGACAGG.......................   read_149624_0_0_1_0_0_0       MATURE            1        50.00            1       100.00            0         0.00                        18   
.......................................................................CAGCAGGCACAGACAGGCAGT...................   read_381610_0_0_0_0_1_0       MATURE            1        50.00            0         0.00            1       100.00                        21   
                                                                                                                                                         ----------                ----------                ----------   
                                                                                                                                                                  2                         1                         1                                          
                                                                                                                                                                                      (50.00)                   (50.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               1               1               2         100.00%
                     ----------      ----------      ----------                
                              1               1               2                



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