[BEGIN]
REFERENCE HAIRPIN
****************************************************************************************************************
ID : mmu-mir-212
DESCRIPTION : mmu-mir-212 MI0000696 Mus musculus miR-212 stem-loop
CHROMOSOME : 11
SPAN : 74986890 - 74986980
LENGTH : 91
SEQUENCE : GGGCAGCGCGCCGGCACCTTGGCTCTAGACTGCTTACTGCCCGGGCCGCCTTCAGTAACAGTCTCCAGTCACGGCCACCGACGCCTGGCCC
OVERHANG THRESHOLD : 75%
****************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-212
ACCID : MI0000696
PARENT : mmu-mir-212
CHROMOSOME : 11
START : 74986890
STOP : 74986980
OFFSET : 56..77
SEQUENCE : TAACAGTCTCCAGTCACGGCCA
STRAND : +
******************************
*** MATURE ***
___________________________________________________________________________________________
GGGCAGCGCGCCGGCACCTTGGCTCTAGACTGCTTACTGCCCGGGCCGCCTTCAGTAACAGTCTCCAGTCACGGCCACCGACGCCTGGCCC REF 11 74986890 - 74986980
TAACAGTCTCCAGTCACGGCCA MATURE 11 74986946 - 74987057 mmu-miR-212 +
___________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........................................................AACAGTCTCCAGTCACGGCC................ read_372408_0_0_2_1_1_0 MATURE 4 25.00 2 100.00 2 14.29 20
........................................................AACAGTCTCCAGTCACGGCCAt.............. read_319647_0_0_0_2_0_1 MATURE 3 18.75 0 0.00 3 21.43 t 21
........................................................AACAGTCTCCAGTCACGGC................. read_377755_0_0_0_1_1_0 MATURE 2 12.50 0 0.00 2 14.29 19
........................................................AACAGTCTCCAGTCACGGCCA............... read_291555_0_0_0_1_0_1 MATURE 2 12.50 0 0.00 2 14.29 21
........................................................AACAGTCTCCAGTCACGGCCAac............. read_55510_0_0_0_1_0_0 MATURE 1 6.25 0 0.00 1 7.14 ac 21
........................................................AACAGTCTCCAGTCACGGCCACt............. read_174566_0_0_0_0_1_0 MATURE 1 6.25 0 0.00 1 7.14 t 22
........................................................AACAGTCTCCAGTCACGGCCAat............. read_389734_0_0_0_0_1_0 MATURE 1 6.25 0 0.00 1 7.14 at 21
........................................................AACAGTCTCCAGTCACGGact............... read_67908_0_0_0_0_1_0 MATURE 1 6.25 0 0.00 1 7.14 act 18
........................................................AACAGTCTCCAGcCACGGCCAt.............. read_235750_0_0_0_0_0_1 MATURE 1 6.25 0 0.00 1 7.14 t 12C8
---------- ---------- ----------
16 2 14
(12.50) (87.50)
*** OTHER ***
___________________________________________________________________________________________
GGGCAGCGCGCCGGCACCTTGGCTCTAGACTGCTTACTGCCCGGGCCGCCTTCAGTAACAGTCTCCAGTCACGGCCACCGACGCCTGGCCC REF 11 74986890 - 74986980
TAACAGTCTCCAGTCACGGCCA MATURE 11 74986946 - 74987057 mmu-miR-212 +
___________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................CCTTGGCTCTAGACTGCTTACT...................................................... read_144139_1_0_0_0_0_2 OTHER 3 60.00 1 100.00 2 50.00 22
................CCTTGGCTCTAGACTGCTTACTG..................................................... read_273572_0_0_0_0_1_0 OTHER 1 20.00 0 0.00 1 25.00 23
.................CTTGGCTCTAGACTGCTTACTG..................................................... read_387627_0_0_0_0_0_1 OTHER 1 20.00 0 0.00 1 25.00 22
---------- ---------- ----------
5 1 4
(20.00) (80.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 2 14 16 76.19%
OTHER 1 4 5 23.81%
---------- ---------- ----------
3 18 21
[END]