[BEGIN]
REFERENCE HAIRPIN
*****************************************************************************************
ID : mmu-mir-205
DESCRIPTION : mmu-mir-205 MI0000248 Mus musculus miR-205 stem-loop
CHROMOSOME : 1
SPAN : 195333657 - 195333724
LENGTH : 68
SEQUENCE : CTCTTGTCCTTCATTCCACCGGAGTCTGTCTTATGCCAACCAGATTTCAGTGGAGTGAAGCTCAGGAG
OVERHANG THRESHOLD : 75%
*****************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-205
ACCID : MI0000248
PARENT : mmu-mir-205
CHROMOSOME : 1
START : 195333657
STOP : 195333724
OFFSET : 7..28
SEQUENCE : TCCTTCATTCCACCGGAGTCTG
STRAND : -
******************************
*** MATURE ***
____________________________________________________________________
CTCTTGTCCTTCATTCCACCGGAGTCTGTCTTATGCCAACCAGATTTCAGTGGAGTGAAGCTCAGGAG REF 1 195333657 - 195333724
TCCTTCATTCCACCGGAGTCTG MATURE 1 195333664 - 195333752 mmu-miR-205 -
____________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......CCTTCATTCCACCGGAGT............................................ read_219138_0_0_0_0_2_2 MATURE 4 40.00 0 0.00 4 57.14 18
.......CCTTCATTCCACCGGAGTC........................................... read_113829_0_0_0_0_1_0 MATURE 1 10.00 0 0.00 1 14.29 19
.......CCTTCATTCCACCGGAGTCTG......................................... read_93417_0_0_1_0_0_0 MATURE 1 10.00 1 33.33 0 0.00 21
.......CCTTCATTCCACCGGAGTCTGa........................................ read_329711_0_1_0_0_0_0 MATURE 1 10.00 1 33.33 0 0.00 a 21
.......CCTTCATTCCACCGGAtTCT.......................................... read_49725_0_0_0_0_1_0 MATURE 1 10.00 0 0.00 1 14.29 16T3
.......CCTTCATTCCACCGGAGTat.......................................... read_271736_0_0_0_0_0_1 MATURE 1 10.00 0 0.00 1 14.29 at 18
.......CCTTCATTCCACCGGAGTCcg......................................... read_309262_1_0_0_0_0_0 MATURE 1 10.00 1 33.33 0 0.00 cg 19
---------- ---------- ----------
10 3 7
(30.00) (70.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 7 10 100.00%
---------- ---------- ----------
3 7 10
[END]