[BEGIN]
REFERENCE HAIRPIN
*************************************************************************************************
ID : mmu-mir-203
DESCRIPTION : mmu-mir-203 MI0000246 Mus musculus miR-203 stem-loop
CHROMOSOME : 12
SPAN : 113369091 - 113369166
LENGTH : 76
SEQUENCE : GCCTGGTCCAGTGGTTCTTGACAGTTCAACAGTTCTGTAGCACAATTGTGAAATGTTTAGGACCACTAGACCCGGC
OVERHANG THRESHOLD : 75%
*************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-203
ACCID : MI0000246
PARENT : mmu-mir-203
CHROMOSOME : 12
START : 113369091
STOP : 113369166
OFFSET : 48..69
SEQUENCE : GTGAAATGTTTAGGACCACTAG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-203*
ACCID : MI0000246
PARENT : mmu-mir-203
CHROMOSOME : 12
START : 113369091
STOP : 113369166
OFFSET : 10..31
SEQUENCE : AGTGGTTCTTGACAGTTCAACA
STRAND : +
******************************
*** MATURE ***
____________________________________________________________________________
GCCTGGTCCAGTGGTTCTTGACAGTTCAACAGTTCTGTAGCACAATTGTGAAATGTTTAGGACCACTAGACCCGGC REF 12 113369091 - 113369166
GTGAAATGTTTAGGACCACTAG MATURE 12 113369139 - 113369235 mmu-miR-203 +
AGTGGTTCTTGACAGTTCAACA MATURESTAR 12 113369101 - 113369197 mmu-miR-203* +
____________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................GAAATGTTTAGGACCACTAGt....... read_357886_5_4_2_2_0_0 MATURE 13 40.62 11 42.31 2 33.33 t 20
.................................................GAAATGTTTAGGACCACTAG........ read_228887_4_1_1_1_0_0 MATURE 7 21.88 6 23.08 1 16.67 20
.................................................GAAATGTTTAGGACCACTAGA....... read_203093_0_2_1_1_0_1 MATURE 5 15.62 3 11.54 2 33.33 21
.................................................GAAATGTTTAGGACCACTAt........ read_13512_0_1_1_0_0_0 MATURE 2 6.25 2 7.69 0 0.00 t 19
.................................................GAAATGTTTAGGAaCACTAGA....... read_340510_0_0_1_0_0_0 MATURE 1 3.12 1 3.85 0 0.00 13A7
.................................................GAAATGTTTAGGACCACTA......... read_70902_0_1_0_0_0_0 MATURE 1 3.12 1 3.85 0 0.00 19
...............................................GTGAAATGTTTAGGACCACT.......... read_2982_0_0_0_0_0_1 MATURE 1 3.12 0 0.00 1 16.67 20
.................................................GAAATGTTTAGGACCACcAGA....... read_136798_1_0_0_0_0_0 MATURE 1 3.12 1 3.85 0 0.00 17C3
.................................................GAAATGTTTAGGACCACTAGtt...... read_211495_1_0_0_0_0_0 MATURE 1 3.12 1 3.85 0 0.00 tt 20
---------- ---------- ----------
32 26 6
(81.25) (18.75)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 26 6 32 100.00%
---------- ---------- ----------
26 6 32
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