[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************************
ID : mmu-mir-202
DESCRIPTION : mmu-mir-202 MI0000245 Mus musculus miR-202 stem-loop
CHROMOSOME : 7
SPAN : 147143588 - 147143659
LENGTH : 72
SEQUENCE : GTTCCTTTTTCCTATGCATATACTTCTTTGTGGATCTGGTCTAAAGAGGTATAGCGCATGGGAAGATGGAGC
OVERHANG THRESHOLD : 75%
*********************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-202-3p
ACCID : MI0000245
PARENT : mmu-mir-202
CHROMOSOME : 7
START : 147143588
STOP : 147143659
OFFSET : 45..66
SEQUENCE : AGAGGTATAGCGCATGGGAAGA
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-202-5p
ACCID : MI0000245
PARENT : mmu-mir-202
CHROMOSOME : 7
START : 147143588
STOP : 147143659
OFFSET : 9..29
SEQUENCE : TTCCTATGCATATACTTCTTT
STRAND : -
******************************
*** MATURE-5P ***
________________________________________________________________________
GTTCCTTTTTCCTATGCATATACTTCTTTGTGGATCTGGTCTAAAGAGGTATAGCGCATGGGAAGATGGAGC REF 7 147143588 - 147143659
AGAGGTATAGCGCATGGGAAGA MATURE-3P 7 147143633 - 147143725 mmu-miR-202-3p -
TTCCTATGCATATACTTCTTT MATURE-5P 7 147143597 - 147143688 mmu-miR-202-5p -
________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........TCCTATGCATATACTTCTTT............................................ read_42455_0_0_0_1_0_0 MATURE-5P 1 100.00 0 0 1 100.00 20
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-5P 0 1 1 100.00%
---------- ---------- ----------
0 1 1
[END]