[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1983
DESCRIPTION : mmu-mir-1983 MI0009990 Mus musculus miR-1983 stem-loop
CHROMOSOME : 13
SPAN : 21988787 - 21988918
LENGTH : 132
SEQUENCE : CCTTTACAGAGAAAGCATGCTCCAGTGGCGCAATCGGTTAGCGCGCGGTACTTATACAGCAGTATATGTGCGGGTGATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCATGTTTTCTTCCCTTTCCGCC
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-1983
ACCID : MI0009990
PARENT : mmu-mir-1983
CHROMOSOME : 13
START : 21988787
STOP : 21988918
OFFSET : 100..120
SEQUENCE : CTCACCTGGAGCATGTTTTCT
STRAND : -
******************************
*** MATURE ***
____________________________________________________________________________________________________________________________________
CCTTTACAGAGAAAGCATGCTCCAGTGGCGCAATCGGTTAGCGCGCGGTACTTATACAGCAGTATATGTGCGGGTGATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCATGTTTTCTTCCCTTTCCGCC REF 13 21988787 - 21988918
CTCACCTGGAGCATGTTTTCT MATURE 13 21988887 - 21989038 mmu-miR-1983 -
____________________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....................................................................................................TCACCTGGAGCATGTTTTC.............. read_269534_0_1_0_0_1_0 MATURE 2 33.33 1 50.00 1 25.00 19
..............................................................................................CGAGCCTCACCTGGAGC...................... read_341591_0_0_0_1_0_0 MATURE 1 16.67 0 0.00 1 25.00 17
....................................................................................................TCACCTGGAGCATGTTTTCT............. read_25220_0_0_0_1_0_0 MATURE 1 16.67 0 0.00 1 25.00 20
....................................................................................................TCACCTGGAGCATGTTTTCTT............ read_82256_0_0_0_1_0_0 MATURE 1 16.67 0 0.00 1 25.00 21
.....................................................................................................CACCTGGAGCATGTTTTCg............. read_65904_0_0_1_0_0_0 MATURE 1 16.67 1 50.00 0 0.00 g 18
---------- ---------- ----------
6 2 4
(33.33) (66.67)
*** OTHER ***
____________________________________________________________________________________________________________________________________
CCTTTACAGAGAAAGCATGCTCCAGTGGCGCAATCGGTTAGCGCGCGGTACTTATACAGCAGTATATGTGCGGGTGATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCATGTTTTCTTCCCTTTCCGCC REF 13 21988787 - 21988918
CTCACCTGGAGCATGTTTTCT MATURE 13 21988887 - 21989038 mmu-miR-1983 -
____________________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............................................................................ATGCCGAGGTTGTGAGT........................................ read_98751_1_1_0_1_0_0 OTHER 3 25.00 2 50.00 1 12.50 17
..........aAAAGCATGCTCCAGTGGCGt...................................................................................................... read_362765_0_0_0_0_1_1 OTHER 2 16.67 0 0.00 2 25.00 t 19
..........................tGCGCAATCGGTTAGCGCGCGGTAC.................................................................................. read_105764_1_0_0_0_0_0 OTHER 1 8.33 1 25.00 0 0.00 24
............................................................................ATGCCGAGGTTGTGAGTTCG..................................... read_340956_0_0_0_1_0_0 OTHER 1 8.33 0 0.00 1 12.50 20
......................CAGTGGCGCAATCGGTTAG............................................................................................ read_52042_0_0_0_0_0_1 OTHER 1 8.33 0 0.00 1 12.50 19
..................................................................................AGGTTGTGAGTTCGAGCC................................. read_315609_0_0_0_1_0_0 OTHER 1 8.33 0 0.00 1 12.50 18
...........AAAGCATGCTCCAGTGGCGC...................................................................................................... read_105943_0_0_0_0_1_0 OTHER 1 8.33 0 0.00 1 12.50 20
...........AAAGCATGCTCCAGTGGCGCA..................................................................................................... read_18916_1_0_0_0_0_0 OTHER 1 8.33 1 25.00 0 0.00 21
...........AAAGCATGCTCCAGTGGCGt...................................................................................................... read_218709_0_0_0_1_0_0 OTHER 1 8.33 0 0.00 1 12.50 t 19
---------- ---------- ----------
12 4 8
(33.33) (66.67)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 2 4 6 33.33%
OTHER 4 8 12 66.67%
---------- ---------- ----------
6 12 18
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