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REFERENCE HAIRPIN
***********************************************************************************************
ID                 : mmu-mir-1982
DESCRIPTION        : mmu-mir-1982 MI0009993 Mus musculus miR-1982 stem-loop
CHROMOSOME         : 10
SPAN               : 80291542 - 80291615
LENGTH             : 74
SEQUENCE           : GTTGGTATTGCTTGGGAGGGTCCTGGGGAGGGGAGTTCTGGCACCCCAACCTCTCACCCTATGTTCTCCCACAG
OVERHANG THRESHOLD : 75%
***********************************************************************************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-1982*
ACCID      : MI0009993
PARENT     : mmu-mir-1982
CHROMOSOME : 10
START      : 80291542
STOP       : 80291615
OFFSET     : 12..31
SEQUENCE   : TTGGGAGGGTCCTGGGGAGG
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-1982.1
ACCID      : MI0009993
PARENT     : mmu-mir-1982
CHROMOSOME : 10
START      : 80291542
STOP       : 80291615
OFFSET     : 52..74
SEQUENCE   : TCTCACCCTATGTTCTCCCACAG
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-1982.2
ACCID      : MI0009993
PARENT     : mmu-mir-1982
CHROMOSOME : 10
START      : 80291542
STOP       : 80291615
OFFSET     : 54..74
SEQUENCE   : TCACCCTATGTTCTCCCACAG
STRAND     : +
******************************



*** MATURE ***
__________________________________________________________________________
GTTGGTATTGCTTGGGAGGGTCCTGGGGAGGGGAGTTCTGGCACCCCAACCTCTCACCCTATGTTCTCCCACAG REF                  10                   80291542 - 80291615  
           TTGGGAGGGTCCTGGGGAGG                                            MATURESTAR           10                   80291554 - 80291646  mmu-miR-1982*        +                    
                                                   TCTCACCCTATGTTCTCCCACAG MATURE               10                   80291594 - 80291689  mmu-miR-1982.1       +                    
                                                     TCACCCTATGTTCTCCCACAG MATURE               10                   80291596 - 80291689  mmu-miR-1982.2       +                    
__________________________________________________________________________

                                                                      -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
....................................................CTCACCCTATGTTCTCCCACAG.   read_246550_0_0_0_0_0_1       MATURE            1        50.00            0         0.00            1       100.00                        22   
....................................................CTCACCCTATGTTCTCCCACAGt   read_338276_0_1_0_0_0_0       MATURE            1        50.00            1       100.00            0         0.00            t           22   
                                                                                                                     ----------                ----------                ----------   
                                                                                                                              2                         1                         1                                          
                                                                                                                                                  (50.00)                   (50.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               1               1               2         100.00%
                     ----------      ----------      ----------                
                              1               1               2                



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