[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-196b
DESCRIPTION : mmu-mir-196b MI0001151 Mus musculus miR-196b stem-loop
CHROMOSOME : 6
SPAN : 52180080 - 52180164
LENGTH : 85
SEQUENCE : AACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTG
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-196b
ACCID : MI0001151
PARENT : mmu-mir-196b
CHROMOSOME : 6
START : 52180080
STOP : 52180164
OFFSET : 16..37
SEQUENCE : TAGGTAGTTTCCTGTTGTTGGG
STRAND : -
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*** MATURE ***
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AACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTG REF 6 52180080 - 52180164
TAGGTAGTTTCCTGTTGTTGGG MATURE 6 52180096 - 52180201 mmu-miR-196b -
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................AGGTAGTTTCCTGTTGTTGG.................................................. read_193178_1_1_3_2_1_0 MATURE 8 21.62 5 23.81 3 18.75 20
................AGGTAGTTTCCTGTTGTTGGGA................................................ read_207612_1_2_1_0_0_1 MATURE 5 13.51 4 19.05 1 6.25 22
................AGGTAGTTTCCTGTTGTTGGG................................................. read_44900_0_1_0_0_0_2 MATURE 3 8.11 1 4.76 2 12.50 21
................AGGTAGTTTCCTGTTGTTGGa................................................. read_51034_0_1_1_0_1_0 MATURE 3 8.11 2 9.52 1 6.25 a 20
................AGGTAGTTTCCTGTTGTTGtgt................................................ read_379880_0_0_1_0_0_1 MATURE 2 5.41 1 4.76 1 6.25 tgt 19
................AGGTAGTTTCCTGTTGTTGGt................................................. read_294706_0_0_1_0_0_1 MATURE 2 5.41 1 4.76 1 6.25 t 20
................AGGTAGTTTCCTGTTGTTGGGt................................................ read_352214_0_0_0_0_1_1 MATURE 2 5.41 0 0.00 2 12.50 t 21
................AGGTAGTTTCCTGTTGTTG................................................... read_387769_1_0_1_0_0_0 MATURE 2 5.41 2 9.52 0 0.00 19
................AGGTAGTTTCCTGTTGTTGGGAa............................................... read_195198_0_1_0_0_0_1 MATURE 2 5.41 1 4.76 1 6.25 a 22
................AGGTAGTTTCCTGTTGTTGGta................................................ read_431_0_0_0_0_0_1 MATURE 1 2.70 0 0.00 1 6.25 ta 20
................AGGTAGTTTCCTGTTGTTGtt................................................. read_273538_0_0_1_0_0_0 MATURE 1 2.70 1 4.76 0 0.00 tt 19
................AGGTAGTTTCCTGTTGcTGG.................................................. read_101396_0_0_0_0_0_1 MATURE 1 2.70 0 0.00 1 6.25 16C3
................AGGTAGTTTCCTGTgGTTGGGAa............................................... read_267844_1_0_0_0_0_0 MATURE 1 2.70 1 4.76 0 0.00 a 14G7
................AGGTAGTTTCCTGTTGTTtg.................................................. read_225301_0_0_0_0_1_0 MATURE 1 2.70 0 0.00 1 6.25 tg 18
................AGGTAGTTTCCTGTTGTTGta................................................. read_79940_0_0_1_0_0_0 MATURE 1 2.70 1 4.76 0 0.00 ta 19
................AGGTAGTTTCCTGTTGTTtga................................................. read_166901_0_0_0_0_1_0 MATURE 1 2.70 0 0.00 1 6.25 tga 18
................AGGTAGTTTCCTGTTGTTGGGtaa.............................................. read_346629_0_1_0_0_0_0 MATURE 1 2.70 1 4.76 0 0.00 taa 21
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37 21 16
(56.76) (43.24)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 21 16 37 100.00%
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21 16 37
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