[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************
ID : mmu-mir-196a-2
DESCRIPTION : mmu-mir-196a-2 MI0000553 Mus musculus miR-196a-2 stem-loop
CHROMOSOME : 15
SPAN : 102803781 - 102803865
LENGTH : 85
SEQUENCE : AGCTGATCTGTGGCTTAGGTAGTTTCATGTTGTTGGGATTGAGTTTTGAACTCGGCAACAAGAAACTGCCTGAGTTACATCAGTC
OVERHANG THRESHOLD : 75%
**********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-196a
ACCID : MI0000553
PARENT : mmu-mir-196a-2
CHROMOSOME : 15
START : 102803781
STOP : 102803865
OFFSET : 16..37
SEQUENCE : TAGGTAGTTTCATGTTGTTGGG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-196a*
ACCID : MI0000553
PARENT : mmu-mir-196a-2
CHROMOSOME : 15
START : 102803781
STOP : 102803865
OFFSET : 52..73
SEQUENCE : TCGGCAACAAGAAACTGCCTGA
STRAND : +
******************************
*** MATURE ***
_____________________________________________________________________________________
AGCTGATCTGTGGCTTAGGTAGTTTCATGTTGTTGGGATTGAGTTTTGAACTCGGCAACAAGAAACTGCCTGAGTTACATCAGTC REF 15 102803781 - 102803865
TAGGTAGTTTCATGTTGTTGGG MATURE 15 102803797 - 102803902 mmu-miR-196a +
TCGGCAACAAGAAACTGCCTGA MATURESTAR 15 102803833 - 102803938 mmu-miR-196a* +
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................AGGTAGTTTCATGTTGTTGGGg................................................ read_300488_0_1_0_0_0_0 MATURE 1 100.00 1 100.00 0 0 g 21
---------- ---------- ----------
1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1 0 1 100.00%
---------- ---------- ----------
1 0 1
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