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REFERENCE HAIRPIN
***************************************************************************************************
ID                 : mmu-mir-1960
DESCRIPTION        : mmu-mir-1960 MI0009957 Mus musculus miR-1960 stem-loop
CHROMOSOME         : 5
SPAN               : 30497279 - 30497356
LENGTH             : 78
SEQUENCE           : CAGAGTGAGCAGCCAGTGCTGTTAGAAGAGGGCTGAGAGCAGGGAGAGCTCTCTTCTGCAGCACTGACTTTTCCTCTG
OVERHANG THRESHOLD : 75%
***************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-1960
ACCID      : MI0009957
PARENT     : mmu-mir-1960
CHROMOSOME : 5
START      : 30497279
STOP       : 30497356
OFFSET     : 13..34
SEQUENCE   : CCAGTGCTGTTAGAAGAGGGCT
STRAND     : +
******************************



*** MATURE ***
______________________________________________________________________________
CAGAGTGAGCAGCCAGTGCTGTTAGAAGAGGGCTGAGAGCAGGGAGAGCTCTCTTCTGCAGCACTGACTTTTCCTCTG REF                  5                    30497279 - 30497356  
            CCAGTGCTGTTAGAAGAGGGCT                                             MATURE               5                    30497292 - 30497390  mmu-miR-1960         +                    
______________________________________________________________________________

                                                                          -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.............CAGTGCTGTTAGAAGAGGGCT.............................................   read_193055_0_1_0_0_0_0       MATURE            1        50.00            1       100.00            0         0.00                        21   
.............CAGTGCTGTTAGAAGAGGGCTt............................................    read_97767_0_0_0_1_0_0       MATURE            1        50.00            0         0.00            1       100.00            t           21   
                                                                                                                         ----------                ----------                ----------   
                                                                                                                                  2                         1                         1                                          
                                                                                                                                                      (50.00)                   (50.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               1               1               2         100.00%
                     ----------      ----------      ----------                
                              1               1               2                



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