[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1959
DESCRIPTION : mmu-mir-1959 MI0009956 Mus musculus miR-1959 stem-loop
CHROMOSOME : 5
SPAN : 119975609 - 119975683
LENGTH : 75
SEQUENCE : AGGGCCGGGGATGTAGCTCAGTGGAGGAGTCCTTGCCCAAAACAGGAAAGGCCCTGGGTTATATCCACGGCCCCA
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-1959
ACCID : MI0009956
PARENT : mmu-mir-1959
CHROMOSOME : 5
START : 119975609
STOP : 119975683
OFFSET : 7..26
SEQUENCE : GGGGATGTAGCTCAGTGGAG
STRAND : -
******************************
*** MATURE ***
___________________________________________________________________________
AGGGCCGGGGATGTAGCTCAGTGGAGGAGTCCTTGCCCAAAACAGGAAAGGCCCTGGGTTATATCCACGGCCCCA REF 5 119975609 - 119975683
GGGGATGTAGCTCAGTGGAG MATURE 5 119975616 - 119975709 mmu-miR-1959 -
___________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......GGGATGTAGCTCAGTGG.................................................... read_349778_19_29_18_2_4_1 MATURE 73 97.33 66 97.06 7 100.00 17
.......GGGATGTAGCTCAGTGGAGGgc............................................... read_25686_0_1_0_0_0_0 MATURE 1 1.33 1 1.47 0 0.00 gc 20
......GGGGATGTAGCTCAGTGG.................................................... read_83441_0_0_1_0_0_0 MATURE 1 1.33 1 1.47 0 0.00 18
---------- ---------- ----------
75 68 7
(90.67) (9.33)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 68 7 75 100.00%
---------- ---------- ----------
68 7 75
[END]