[BEGIN]
REFERENCE HAIRPIN
***********************************************************************************************************************
ID : mmu-mir-1955
DESCRIPTION : mmu-mir-1955 MI0009950 Mus musculus miR-1955 stem-loop
CHROMOSOME : 2
SPAN : 92032134 - 92032231
LENGTH : 98
SEQUENCE : CTGGTTTACTTACTACAAGTCCCAGGATGCACTGCAGCTTTTTCTTAACTTCAGATAAGAGCATTGCATGCTGGGACATGTAGTTGGTTTAAATAGCA
OVERHANG THRESHOLD : 75%
***********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-1955
ACCID : MI0009950
PARENT : mmu-mir-1955
CHROMOSOME : 2
START : 92032134
STOP : 92032231
OFFSET : 18..42
SEQUENCE : AGTCCCAGGATGCACTGCAGCTTTT
STRAND : +
******************************
*** MATURE ***
__________________________________________________________________________________________________
CTGGTTTACTTACTACAAGTCCCAGGATGCACTGCAGCTTTTTCTTAACTTCAGATAAGAGCATTGCATGCTGGGACATGTAGTTGGTTTAAATAGCA REF 2 92032134 - 92032231
AGTCCCAGGATGCACTGCAGCTTTT MATURE 2 92032152 - 92032273 mmu-miR-1955 +
__________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..................GTCCCAGGATGCACTGCA............................................................... read_407922_0_0_1_0_0_0 MATURE 1 100.00 1 100.00 0 0 18
---------- ---------- ----------
1 1 0
(100.00) (0.00)
*** OTHER ***
__________________________________________________________________________________________________
CTGGTTTACTTACTACAAGTCCCAGGATGCACTGCAGCTTTTTCTTAACTTCAGATAAGAGCATTGCATGCTGGGACATGTAGTTGGTTTAAATAGCA REF 2 92032134 - 92032231
AGTCCCAGGATGCACTGCAGCTTTT MATURE 2 92032152 - 92032273 mmu-miR-1955 +
__________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................................................AGCATTGCATGCTGGGACATG................... read_269628_1_1_0_0_0_0 OTHER 2 40.00 2 50.00 0 0.00 21
...........................................................AGCATTGCATGCTGGGACATGT.................. read_348307_0_0_2_0_0_0 OTHER 2 40.00 2 50.00 0 0.00 22
...........................................................AGCATTGCATGCTGGGACAT.................... read_270875_0_0_0_0_0_1 OTHER 1 20.00 0 0.00 1 100.00 20
---------- ---------- ----------
5 4 1
(80.00) (20.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1 0 1 16.67%
OTHER 4 1 5 83.33%
---------- ---------- ----------
5 1 6
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