[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************************
ID : mmu-mir-195
DESCRIPTION : mmu-mir-195 MI0000237 Mus musculus miR-195 stem-loop
CHROMOSOME : 11
SPAN : 70048544 - 70048637
LENGTH : 94
SEQUENCE : ACACCCAACTCTCCTGGCTCTAGCAGCACAGAAATATTGGCATGGGGAAGTGAGTCTGCCAATATTGGCTGTGCTGCTCCAGGCAGGGTGGTGA
OVERHANG THRESHOLD : 75%
*******************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-195
ACCID : MI0000237
PARENT : mmu-mir-195
CHROMOSOME : 11
START : 70048544
STOP : 70048637
OFFSET : 21..41
SEQUENCE : TAGCAGCACAGAAATATTGGC
STRAND : +
******************************
*** MATURE ***
______________________________________________________________________________________________
ACACCCAACTCTCCTGGCTCTAGCAGCACAGAAATATTGGCATGGGGAAGTGAGTCTGCCAATATTGGCTGTGCTGCTCCAGGCAGGGTGGTGA REF 11 70048544 - 70048637
TAGCAGCACAGAAATATTGGC MATURE 11 70048565 - 70048678 mmu-miR-195 +
______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....................AGCAGCACAGAAATATTGGCA..................................................... read_355158_24_26_27_4_8_15 MATURE 104 42.28 77 40.74 27 47.37 21
.....................AGCAGCACAGAAATATTGGCAT.................................................... read_294929_13_9_15_2_2_2 MATURE 43 17.48 37 19.58 6 10.53 22
.....................AGCAGCACAGAAATATTGGCAa.................................................... read_166000_6_7_11_1_3_3 MATURE 31 12.60 24 12.70 7 12.28 a 21
.....................AGCAGCACAGAAATATTGGC...................................................... read_173373_3_8_9_4_2_0 MATURE 26 10.57 20 10.58 6 10.53 20
.....................AGCAGCACAGAAATATTGG....................................................... read_381838_0_5_0_0_0_1 MATURE 6 2.44 5 2.65 1 1.75 19
.....................AGCAGCACAGAAATATTGGa...................................................... read_390612_0_2_1_0_1_0 MATURE 4 1.63 3 1.59 1 1.75 a 19
.....................AGCAGCACAGAAATATTG........................................................ read_346351_0_0_0_1_1_1 MATURE 3 1.22 0 0.00 3 5.26 18
.....................AGCtGCACAGAAATATTGGCAT.................................................... read_80418_0_2_0_0_0_0 MATURE 2 0.81 2 1.06 0 0.00 3T18
.....................AGCAGCACAtAAATATTGGCA..................................................... read_26577_1_1_0_0_0_0 MATURE 2 0.81 2 1.06 0 0.00 9T11
.....................AGCAGCACAGAAATATTGGCt..................................................... read_328466_1_1_0_0_0_0 MATURE 2 0.81 2 1.06 0 0.00 t 20
.....................AGCAGCACAGAAATATTGGCAaa................................................... read_283096_1_0_0_0_0_1 MATURE 2 0.81 1 0.53 1 1.75 aa 21
.....................AGCAGCACgGAAATATTGGC...................................................... read_312358_0_0_0_0_1_1 MATURE 2 0.81 0 0.00 2 3.51 8G11
.....................AGCAGCACgGAAATATTGGCA..................................................... read_59286_0_1_0_0_0_1 MATURE 2 0.81 1 0.53 1 1.75 8G12
.....................AGCAGCACAGAAATATTGGaa..................................................... read_204743_1_0_0_0_0_1 MATURE 2 0.81 1 0.53 1 1.75 aa 19
.....................AGCAGCACAGAAATATTGa....................................................... read_55652_0_0_1_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 a 18
.....................AGCAGCACAGAAATATTGGCgt.................................................... read_193974_1_0_0_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 gt 20
.....................AGCAGCACAGAAATATT......................................................... read_328111_0_1_0_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 17
.....................AGCAGCACAGAAATATTGGta..................................................... read_87268_0_1_0_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 ta 19
.....................AGCAGCACAGAAATATTGGCAat................................................... read_15409_0_0_1_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 at 21
.........................GCACAGAAATATTGGCA..................................................... read_40148_0_1_0_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 17
.....................AGCAGCACAGAAATcTTGGCAT.................................................... read_93450_1_0_0_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 14C7
.....................AGCAGCACAGAAATATTGGCAagt.................................................. read_191683_0_0_1_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 agt 21
.....................AGCAGCACAGAAATATTGGaaa.................................................... read_363115_1_0_0_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 aaa 19
.....................AGCAGCACAGAAATgTTGGCAa.................................................... read_131396_1_0_0_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 a 14G6
.....................AGCAGCACAGAAATgTTGGCA..................................................... read_131506_1_0_0_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 14G6
.....................AGCAGCACAGAAAgATTGGCA..................................................... read_186744_0_1_0_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 13G7
.....................AGCAGCACAGAAATATTGGCATt................................................... read_324935_0_0_1_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 t 22
.....................AGCAGCACAtAAATATTGGC...................................................... read_113437_0_0_0_0_1_0 MATURE 1 0.41 0 0.00 1 1.75 9T10
.....................AGCAGCACAGAAATATTGGCAct................................................... read_130809_0_0_1_0_0_0 MATURE 1 0.41 1 0.53 0 0.00 ct 21
---------- ---------- ----------
246 189 57
(76.83) (23.17)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 189 57 246 100.00%
---------- ---------- ----------
189 57 246
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