[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1943
DESCRIPTION : mmu-mir-1943 MI0009932 Mus musculus miR-1943 stem-loop
CHROMOSOME : 15
SPAN : 79205658 - 79205730
LENGTH : 73
SEQUENCE : GGCTGGGAAGGGAGGATCTGGGCACCTGGACCAGCTCCTCCCTGCAGGTGCCAGCTCCTCCCTTCCCAGTCAC
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-1943
ACCID : MI0009932
PARENT : mmu-mir-1943
CHROMOSOME : 15
START : 79205658
STOP : 79205730
OFFSET : 8..30
SEQUENCE : AAGGGAGGATCTGGGCACCTGGA
STRAND : -
******************************
*** MATURE ***
_________________________________________________________________________
GGCTGGGAAGGGAGGATCTGGGCACCTGGACCAGCTCCTCCCTGCAGGTGCCAGCTCCTCCCTTCCCAGTCAC REF 15 79205658 - 79205730
AAGGGAGGATCTGGGCACCTGGA MATURE 15 79205666 - 79205760 mmu-miR-1943 -
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............AGGATCTGGGCACCTGGA............................................ read_107551_0_0_1_0_0_0 MATURE 1 25.00 1 50.00 0 0.00 18
.........GGGAGGATCTGGGCACCTGGAa........................................... read_27721_1_0_0_0_0_0 MATURE 1 25.00 1 50.00 0 0.00 a 21
.........GGGAGGATCTGGGCACCTGGA............................................ read_30442_0_0_0_0_1_0 MATURE 1 25.00 0 0.00 1 50.00 21
.........GGGAGGATCTGGGCACCTGGAC........................................... read_372885_0_0_0_0_1_0 MATURE 1 25.00 0 0.00 1 50.00 22
---------- ---------- ----------
4 2 2
(50.00) (50.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 2 2 4 100.00%
---------- ---------- ----------
2 2 4
[END]