[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1937b
DESCRIPTION : mmu-mir-1937b MI0009938 Mus musculus miR-1937b stem-loop
CHROMOSOME : 16
SPAN : 4820930 - 4821056
LENGTH : 127
SEQUENCE : GGGTCTCTGAGAACTGGGGTAGGCCACAAATCCCGGACGAGCCCCCACATGTAAGACCCCCATGCTGGGCCTCTGCTTAAGTCCCGGGATGAGCTGGCCAACACCCCAACATCTTGAGAGAAAACCA
OVERHANG THRESHOLD : 75%
****************************************************************************************************************************************************
TARGET
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CATEGORY : MATURE
ID : mmu-miR-1937b
ACCID : MI0009938
PARENT : mmu-mir-1937b
CHROMOSOME : 16
START : 4820930
STOP : 4821056
OFFSET : 30..47
SEQUENCE : ATCCCGGACGAGCCCCCA
STRAND : -
******************************
*** MATURE ***
_______________________________________________________________________________________________________________________________
GGGTCTCTGAGAACTGGGGTAGGCCACAAATCCCGGACGAGCCCCCACATGTAAGACCCCCATGCTGGGCCTCTGCTTAAGTCCCGGGATGAGCTGGCCAACACCCCAACATCTTGAGAGAAAACCA REF 16 4820930 - 4821056
ATCCCGGACGAGCCCCCA MATURE 16 4820960 - 4821103 mmu-miR-1937b -
_______________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................CAAATCCCGGACGAGCCCCCA................................................................................. read_104369_93_101_40_38_50_57 MATURE 379 60.93 234 58.94 145 64.44 21
.............................ATCCCGGACGAGCCCCCA................................................................................. read_94914_31_18_21_6_14_12 MATURE 102 16.40 70 17.63 32 14.22 18
............................cATCCCGGACGAGCCCCCA................................................................................. read_168287_13_11_9_10_8_4 MATURE 55 8.84 33 8.31 22 9.78 18
...........................AAATCCCGGACGAGCCCCCA................................................................................. read_212011_16_9_5_2_2_3 MATURE 37 5.95 30 7.56 7 3.11 20
..........................CAAATCCCGGACGAGCCCCCc................................................................................. read_324895_2_3_1_4_3_0 MATURE 13 2.09 6 1.51 7 3.11 c 20
............................AATCCCGGACGAGCCCCCA................................................................................. read_344080_2_1_1_1_0_0 MATURE 5 0.80 4 1.01 1 0.44 19
..........................CAAATCCCGGACGcGCCCCCA................................................................................. read_192681_2_1_1_0_1_0 MATURE 5 0.80 4 1.01 1 0.44 13C7
..........................CAAATCCCGGACGAcCCCCCA................................................................................. read_33245_0_1_1_0_0_0 MATURE 2 0.32 2 0.50 0 0.00 14C6
.............................ATCCCGGACGAGCCCCC.................................................................................. read_162812_0_0_1_1_0_0 MATURE 2 0.32 1 0.25 1 0.44 17
..........................CAAATCCCGGACGAGCCCC................................................................................... read_408473_0_0_1_0_0_1 MATURE 2 0.32 1 0.25 1 0.44 19
..........................CAAATCCCGGACGAGaCCCCA................................................................................. read_322962_2_0_0_0_0_0 MATURE 2 0.32 2 0.50 0 0.00 15A5
..........................CAAAcCCCGGACGAGCCCCCA................................................................................. read_268686_1_0_0_0_0_1 MATURE 2 0.32 1 0.25 1 0.44 4C16
..........................CAAATCCCGGACGAGtCCCCA................................................................................. read_288647_0_1_0_0_0_1 MATURE 2 0.32 1 0.25 1 0.44 15T5
..........................CAAATCCCGGACGAGCCCCC.................................................................................. read_131458_0_0_0_1_1_0 MATURE 2 0.32 0 0.00 2 0.89 20
..........................CAAATCCCGGACGtGCCCCCA................................................................................. read_323863_0_0_1_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 13T7
..........................CAAATCCCGGACGgGCCCCCA................................................................................. read_186166_0_0_0_1_0_0 MATURE 1 0.16 0 0.00 1 0.44 13G7
............................AATCCCGGACGAGCCCCC.................................................................................. read_51979_0_0_1_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 18
...........................AAATCCCGGACGAGCCCCCc................................................................................. read_60094_0_1_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 c 19
..........................CAAATCCCGGACGAtCCCCCA................................................................................. read_314212_1_0_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 14T6
..........................CAAATCCCGGACGAGCCC.................................................................................... read_305603_0_0_0_0_0_1 MATURE 1 0.16 0 0.00 1 0.44 18
..........................CAAATCCCGtACGAGCCCCCA................................................................................. read_141119_0_1_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 9T11
..........................gAAATCCCGGACGAGCCCCCA................................................................................. read_187469_0_1_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 20
...........................AAATCCCGGACGAGCCCCC.................................................................................. read_399138_0_1_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 19
..........................CAAATCCCGGACGAGCC..................................................................................... read_78892_0_0_0_1_0_0 MATURE 1 0.16 0 0.00 1 0.44 17
..........................CAAATCCCGGACGAGCCCCCAC................................................................................ read_5921_0_0_0_1_0_0 MATURE 1 0.16 0 0.00 1 0.44 22
..........................CAAATCCCGGACGAGCCCCCg................................................................................. read_199652_1_0_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 g 20
---------- ---------- ----------
622 397 225
(63.83) (36.17)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 397 225 622 100.00%
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397 225 622
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