[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1937a
DESCRIPTION : mmu-mir-1937a MI0009926 Mus musculus miR-1937a stem-loop
CHROMOSOME : 12
SPAN : 18186049 - 18186166
LENGTH : 118
SEQUENCE : TTCTTGGGGTTCTGGGTGCTCCCAAATCCCGGACGAGCCCCCAAATGTAGGACCCCCCCAATATGGCGACTCCCACTCTAATCCAGGGATAGGGTGCACCCACGAACACGCAAGAATC
OVERHANG THRESHOLD : 75%
*******************************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-1937a
ACCID : MI0009926
PARENT : mmu-mir-1937a
CHROMOSOME : 12
START : 18186049
STOP : 18186166
OFFSET : 25..43
SEQUENCE : AATCCCGGACGAGCCCCCA
STRAND : +
******************************
*** MATURE ***
______________________________________________________________________________________________________________________
TTCTTGGGGTTCTGGGTGCTCCCAAATCCCGGACGAGCCCCCAAATGTAGGACCCCCCCAATATGGCGACTCCCACTCTAATCCAGGGATAGGGTGCACCCACGAACACGCAAGAATC REF 12 18186049 - 18186166
AATCCCGGACGAGCCCCCA MATURE 12 18186074 - 18186209 mmu-miR-1937a +
______________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......................CAAATCCCGGACGAGCCCCCA............................................................................ read_104369_93_101_40_38_50_57 MATURE 379 60.93 234 58.79 145 64.73 21
.........................ATCCCGGACGAGCCCCCA............................................................................ read_94914_31_18_21_6_14_12 MATURE 102 16.40 70 17.59 32 14.29 18
........................cATCCCGGACGAGCCCCCA............................................................................ read_168287_13_11_9_10_8_4 MATURE 55 8.84 33 8.29 22 9.82 18
.......................AAATCCCGGACGAGCCCCCA............................................................................ read_212011_16_9_5_2_2_3 MATURE 37 5.95 30 7.54 7 3.12 20
......................CAAATCCCGGACGAGCCCCCc............................................................................ read_324895_2_3_1_4_3_0 MATURE 13 2.09 6 1.51 7 3.12 c 20
........................AATCCCGGACGAGCCCCCA............................................................................ read_344080_2_1_1_1_0_0 MATURE 5 0.80 4 1.01 1 0.45 19
......................CAAATCCCGGACGcGCCCCCA............................................................................ read_192681_2_1_1_0_1_0 MATURE 5 0.80 4 1.01 1 0.45 13C7
......................CAAATCCCGGACGAcCCCCCA............................................................................ read_33245_0_1_1_0_0_0 MATURE 2 0.32 2 0.50 0 0.00 14C6
......................CAAATCCCGGACGAGaCCCCA............................................................................ read_322962_2_0_0_0_0_0 MATURE 2 0.32 2 0.50 0 0.00 15A5
......................CAAATCCCGGACGAGCCCC.............................................................................. read_408473_0_0_1_0_0_1 MATURE 2 0.32 1 0.25 1 0.45 19
.........................ATCCCGGACGAGCCCCC............................................................................. read_162812_0_0_1_1_0_0 MATURE 2 0.32 1 0.25 1 0.45 17
......................CAAATCCCGGACGAGtCCCCA............................................................................ read_288647_0_1_0_0_0_1 MATURE 2 0.32 1 0.25 1 0.45 15T5
......................CAAAcCCCGGACGAGCCCCCA............................................................................ read_268686_1_0_0_0_0_1 MATURE 2 0.32 1 0.25 1 0.45 4C16
......................CAAATCCCGGACGAGCCCCC............................................................................. read_131458_0_0_0_1_1_0 MATURE 2 0.32 0 0.00 2 0.89 20
......................CAAATCCCGGACGgGCCCCCA............................................................................ read_186166_0_0_0_1_0_0 MATURE 1 0.16 0 0.00 1 0.45 13G7
.......................AAATCCCGGACGAGCCCCCc............................................................................ read_60094_0_1_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 c 19
.......................AAATCCCGGACGAGCCCCC............................................................................. read_399138_0_1_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 19
......................CAAATCCCGGACGAGCCC............................................................................... read_305603_0_0_0_0_0_1 MATURE 1 0.16 0 0.00 1 0.45 18
......................CAAATCCCGGACGAtCCCCCA............................................................................ read_314212_1_0_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 14T6
......................CAAATCCCGtACGAGCCCCCA............................................................................ read_141119_0_1_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 9T11
......................gAAATCCCGGACGAGCCCCCA............................................................................ read_187469_0_1_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 20
...........................CCCGGACGAGCCCCCAAA.......................................................................... read_259939_0_1_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 18
......................CAAATCCCGGACGAGCC................................................................................ read_78892_0_0_0_1_0_0 MATURE 1 0.16 0 0.00 1 0.45 17
........................AATCCCGGACGAGCCCCC............................................................................. read_51979_0_0_1_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 18
......................CAAATCCCGGACGAGCCCCCg............................................................................ read_199652_1_0_0_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 g 20
......................CAAATCCCGGACGtGCCCCCA............................................................................ read_323863_0_0_1_0_0_0 MATURE 1 0.16 1 0.25 0 0.00 13T7
---------- ---------- ----------
622 398 224
(63.99) (36.01)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 398 224 622 100.00%
---------- ---------- ----------
398 224 622
[END]