[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************
ID : mmu-mir-1935
DESCRIPTION : mmu-mir-1935 MI0009924 Mus musculus miR-1935 stem-loop
CHROMOSOME : 11
SPAN : 85336223 - 85336282
LENGTH : 60
SEQUENCE : ACTCTGGAGGCAGAGGCTGGCGGATCTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGA
OVERHANG THRESHOLD : 75%
*********************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-1935
ACCID : MI0009924
PARENT : mmu-mir-1935
CHROMOSOME : 11
START : 85336223
STOP : 85336282
OFFSET : 8..29
SEQUENCE : AGGCAGAGGCTGGCGGATCTCT
STRAND : +
******************************
*** OTHER ***
____________________________________________________________
ACTCTGGAGGCAGAGGCTGGCGGATCTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGA REF 11 85336223 - 85336282
AGGCAGAGGCTGGCGGATCTCT MATURE 11 85336231 - 85336311 mmu-miR-1935 +
____________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................................CCAGCCTGGTCTACAGAGT... read_219424_0_0_0_0_1_1 OTHER 2 20.00 0 0.00 2 25.00 19
.............................GAGTTCGAGGCCAGCCTG.............. read_342225_0_0_0_0_1_1 OTHER 2 20.00 0 0.00 2 25.00 18
.......................................CCAGCCTGGTCTACAGAGTG.. read_224375_0_0_0_0_0_1 OTHER 1 10.00 0 0.00 1 12.50 20
............................TGAGTTCGAGGCCAGCCTGGTC........... read_296447_1_0_0_0_0_0 OTHER 1 10.00 1 50.00 0 0.00 22
..............................AGTTCGAGGCCAGCCTGG............. read_168240_0_0_0_0_1_0 OTHER 1 10.00 0 0.00 1 12.50 18
.............................GAGTTCGAGGCCAGCCTGG............. read_350959_1_0_0_0_0_0 OTHER 1 10.00 1 50.00 0 0.00 19
..........................................GCCTGGTCTACAGAGTGA. read_130672_0_0_0_0_1_0 OTHER 1 10.00 0 0.00 1 12.50 18
.................................TCGAGGCCAGCCTGGTCTAC........ read_148623_0_0_0_0_1_0 OTHER 1 10.00 0 0.00 1 12.50 20
---------- ---------- ----------
10 2 8
(20.00) (80.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
OTHER 2 8 10 100.00%
---------- ---------- ----------
2 8 10
[END]