[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************************
ID : mmu-mir-1934
DESCRIPTION : mmu-mir-1934 MI0009923 Mus musculus miR-1934 stem-loop
CHROMOSOME : 11
SPAN : 69476545 - 69476627
LENGTH : 83
SEQUENCE : CTGGGCCTTCTTTCTGGTCCCCTGCTTCGTCCTCTGTCCAGATGTTAAGAGGATGACGGTGGGGCTGGTGAGATGGCTCAGCG
OVERHANG THRESHOLD : 75%
********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-1934
ACCID : MI0009923
PARENT : mmu-mir-1934
CHROMOSOME : 11
START : 69476545
STOP : 69476627
OFFSET : 13..35
SEQUENCE : TCTGGTCCCCTGCTTCGTCCTCT
STRAND : +
******************************
*** MATURE ***
___________________________________________________________________________________
CTGGGCCTTCTTTCTGGTCCCCTGCTTCGTCCTCTGTCCAGATGTTAAGAGGATGACGGTGGGGCTGGTGAGATGGCTCAGCG REF 11 69476545 - 69476627
TCTGGTCCCCTGCTTCGTCCTCT MATURE 11 69476558 - 69476662 mmu-miR-1934 +
___________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............CTGGTCCCCTGCTTCGTCCTCT................................................. read_386997_1_2_1_0_0_1 MATURE 5 50.00 4 57.14 1 33.33 22
.............CTGGTCCCCTGCTTCGTCCTC.................................................. read_14173_0_1_0_0_0_0 MATURE 1 10.00 1 14.29 0 0.00 21
...........TTCTGGTCCCCTGCTTCGTC..................................................... read_53176_1_0_0_0_0_0 MATURE 1 10.00 1 14.29 0 0.00 20
.............CTGGTCCCCTGCTTCGTCC.................................................... read_49642_0_0_0_1_0_0 MATURE 1 10.00 0 0.00 1 33.33 19
...........TTCTGGTCCCCTGCTTCGTCCT................................................... read_201824_0_0_0_0_1_0 MATURE 1 10.00 0 0.00 1 33.33 22
.............CTGGTCCCCTGCTTCGTC..................................................... read_328196_1_0_0_0_0_0 MATURE 1 10.00 1 14.29 0 0.00 18
---------- ---------- ----------
10 7 3
(70.00) (30.00)
*** OTHER ***
___________________________________________________________________________________
CTGGGCCTTCTTTCTGGTCCCCTGCTTCGTCCTCTGTCCAGATGTTAAGAGGATGACGGTGGGGCTGGTGAGATGGCTCAGCG REF 11 69476545 - 69476627
TCTGGTCCCCTGCTTCGTCCTCT MATURE 11 69476558 - 69476662 mmu-miR-1934 +
___________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..................................................GGATGACGGTGaGGCTGGTGAa............ read_80141_1_0_0_0_0_0 OTHER 1 50.00 1 50.00 0 0 a 11A9
..................................................GGATGACGGTGGGGCTGGTGA............. read_248407_0_1_0_0_0_0 OTHER 1 50.00 1 50.00 0 0 21
---------- ---------- ----------
2 2 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 7 3 10 83.33%
OTHER 2 0 2 16.67%
---------- ---------- ----------
9 3 12
[END]